HA22I_ARATH
ID HA22I_ARATH Reviewed; 296 AA.
AC Q8LE10; Q9FH69;
DT 04-JAN-2005, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=HVA22-like protein i;
DE Short=AtHVA22i;
GN Name=HVA22I; OrderedLocusNames=At5g42560; ORFNames=K16E1.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q8LE10-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the DP1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB09327.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB022210; BAB09327.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED94826.1; -; Genomic_DNA.
DR EMBL; AY085687; AAM62906.1; -; mRNA.
DR RefSeq; NP_568606.1; NM_123620.4. [Q8LE10-1]
DR AlphaFoldDB; Q8LE10; -.
DR STRING; 3702.AT5G42560.1; -.
DR iPTMnet; Q8LE10; -.
DR PaxDb; Q8LE10; -.
DR PRIDE; Q8LE10; -.
DR ProteomicsDB; 232212; -. [Q8LE10-1]
DR EnsemblPlants; AT5G42560.1; AT5G42560.1; AT5G42560. [Q8LE10-1]
DR GeneID; 834262; -.
DR Gramene; AT5G42560.1; AT5G42560.1; AT5G42560. [Q8LE10-1]
DR KEGG; ath:AT5G42560; -.
DR Araport; AT5G42560; -.
DR TAIR; locus:2152686; AT5G42560.
DR eggNOG; KOG1726; Eukaryota.
DR HOGENOM; CLU_028431_5_0_1; -.
DR InParanoid; Q8LE10; -.
DR PhylomeDB; Q8LE10; -.
DR PRO; PR:Q8LE10; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8LE10; baseline and differential.
DR Genevisible; Q8LE10; AT.
DR InterPro; IPR004345; TB2_DP1_HVA22.
DR PANTHER; PTHR12300; PTHR12300; 1.
DR Pfam; PF03134; TB2_DP1_HVA22; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..296
FT /note="HVA22-like protein i"
FT /id="PRO_0000101843"
FT REGION 146..296
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 177..210
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 218..250
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 274..296
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 158
FT /note="G -> V (in Ref. 3; AAM62906)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 296 AA; 33364 MW; 2F72AB9A958979AD CRC64;
MIGSFLTRGL VMVLGYAYPA YECYKTVEKN RPEIEQLRFW CQYWILVACL TVFERVGDAF
VSWVPMYSEA KLAFFIYLWY PKTRGTTYVY ESFFRPYLSQ HENDIDHSLL ELRTRAGDMA
VIYWQRVASY GQTRILEILQ YVAAQSTPRP QPPQKRGGRA NQAPAKPKKA PVPQSEPEEV
SLSSSSSSSS SENEGNEPTR KVSGPSRPRP TVTSVPAADP KNAGTTQIAQ KSVASPIVNP
PQSTTQVEPM QIEEVEGEAE SGNENPNPEG PKETVMEETI RMTRGRLRKT RSEESR