AMY_STRLI
ID AMY_STRLI Reviewed; 919 AA.
AC Q05884;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Alpha-amylase;
DE EC=3.2.1.1;
DE AltName: Full=1,4-alpha-D-glucan glucanohydrolase;
DE Flags: Precursor;
GN Name=amy;
OS Streptomyces lividans.
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=1916;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 34-43.
RC STRAIN=TK24;
RX PubMed=8424949; DOI=10.1016/0167-4781(93)90063-j;
RA Tsao L.-S., Lin L.-L., Chen J.-C., Chen J.-H., Hsu W.-H.;
RT "Cloning and characterization of an alpha-amylase gene from Streptomyces
RT lividans.";
RL Biochim. Biophys. Acta 1171:255-262(1993).
RN [2]
RP ERRATUM OF PUBMED:8424949.
RX PubMed=8485150;
RA Tsao L.-S., Lin L.-L., Chen J.-C., Chen J.-H., Hsu W.-H.;
RL Biochim. Biophys. Acta 1173:119-119(1993).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in
CC polysaccharides containing three or more (1->4)-alpha-linked D-
CC glucose units.; EC=3.2.1.1;
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence={ECO:0000250};
CC Note=Binds 1 Ca(2+) ion per subunit. {ECO:0000250};
CC -!- SUBUNIT: Monomer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family. {ECO:0000305}.
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DR EMBL; X70255; CAA49759.1; -; Genomic_DNA.
DR PIR; S28179; S28179.
DR AlphaFoldDB; Q05884; -.
DR SMR; Q05884; -.
DR CAZy; CBM41; Carbohydrate-Binding Module Family 41.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004556; F:alpha-amylase activity; IEA:UniProtKB-EC.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR CDD; cd10315; CBM41_pullulanase; 2.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.60.40.1180; -; 1.
DR InterPro; IPR006048; A-amylase/branching_C.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR005323; CBM41_pullulanase.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02806; Alpha-amylase_C; 1.
DR Pfam; PF03714; PUD; 2.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF49452; SSF49452; 2.
DR SUPFAM; SSF51445; SSF51445; 1.
PE 1: Evidence at protein level;
KW Calcium; Carbohydrate metabolism; Direct protein sequencing; Glycosidase;
KW Hydrolase; Metal-binding; Secreted; Signal.
FT SIGNAL 1..33
FT /evidence="ECO:0000269|PubMed:8424949"
FT CHAIN 34..919
FT /note="Alpha-amylase"
FT /id="PRO_0000001345"
FT REGION 704..729
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 706..729
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 312
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 346
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT BINDING 182
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 281
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 316
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT SITE 417
FT /note="Transition state stabilizer"
FT /evidence="ECO:0000250"
SQ SEQUENCE 919 AA; 100642 MW; 035B59FB80F0BD10 CRC64;
MPATRRTARV RRVAAVTVTA LAAALLPPLA ARADTPPAPP SDAKLAKTAA RHDLTREQFY
FSCRTLRQRG RRERPRRLTG TRLTTGYDPT DKGFYQGGDL KGLTEKLDYI KGLGTTSIWM
APIFKNQPVQ GTGKDASAGY HGYWITDFTQ VDPHFGTNKD LKNLISKAHA KGMKVFFDVI
TNHTADVVDY EEKSYDYLSK GAFPYLTKDG QPFDDADYAD GERRFPRVDS GSFPRTPTVP
TAKKNLKVPS WLNDPAMYHN RGDSTWAGES ATYGDFNGLD DLWTERPEVV GGMEKIYQRW
VEDFAIDGFR IDTVKHVDME FWTQWATALD AYAAKKGRDD FFMFGEVYSA DTSVTAPYVT
QGRLDSTLDF PFQDAARAYA SQGGSARKLA AVFGDDYKYT TDKANAYEQV TFLGNHDMGR
IGTFLKQDAP EAGDAELLKK DRLANELMFL SRGNPVIYYG DEQGFTGAGG DKDARQPMFA
SRTADYLDDD QLGTDRTHAE AAYDTSAPLY RQISALAELR KANPALADGV QTERYAADGA
GIYAFSRTDA KTGTEYVVAF NNAGTEPSAA FATGSAGMTF RGLYGTDATV KSGADSKVTV
TVPARSAVVL KAAGRLAAPA AEPTISLHAP DPGATGTVEL SADVAGGQLN RVVFAAQTGD
GKWRTLGTAD HAPYKVTHTV DADTPAGTAL RYKAVVVDSA GRTASGRLHH RHPARRGGAH
RRLPGPRGRP LQARRRELRR LGPVRLGRPR RREAHHLARH PPLHRPGRLR AFAYVKLKPG
ASTVGFLVID KDGNKDVAAD RTIDVTETGE VWIEQGEEQL VTERPEYPAQ DTTKAVLHYK
RADGNYDGWG LHVWGDAANP TDWAKPLQPV RTDPYGAVFE VPLTDGASSL SYMVHKGDEK
DLPTDQAWTS RPTATRCGC