AMY_STRVL
ID AMY_STRVL Reviewed; 569 AA.
AC P22998;
DT 01-AUG-1991, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1991, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Alpha-amylase;
DE EC=3.2.1.1;
DE AltName: Full=1,4-alpha-D-glucan glucanohydrolase;
DE Flags: Precursor;
GN Name=aml;
OS Streptomyces violaceus (Streptomyces venezuelae).
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=1936;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 15068 / DSM 41111 / IMRU 3629;
RX PubMed=3266752; DOI=10.1016/0378-1119(88)90166-7;
RA Virolle M.-J., Long C.M., Chang S., Bibb M.J.;
RT "Cloning, characterisation and regulation of an alpha-amylase gene from
RT Streptomyces venezuelae.";
RL Gene 74:321-334(1988).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in
CC polysaccharides containing three or more (1->4)-alpha-linked D-
CC glucose units.; EC=3.2.1.1;
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence={ECO:0000250};
CC Note=Binds 1 Ca(2+) ion per subunit. {ECO:0000250};
CC -!- SUBUNIT: Monomer. {ECO:0000250}.
CC -!- INDUCTION: By maltose, and repression by glucose.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family. {ECO:0000305}.
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DR EMBL; M25263; AAB36561.1; -; Genomic_DNA.
DR PIR; JS0101; JS0101.
DR AlphaFoldDB; P22998; -.
DR SMR; P22998; -.
DR CAZy; CBM20; Carbohydrate-Binding Module Family 20.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR GO; GO:0004556; F:alpha-amylase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:2001070; F:starch binding; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.60.40.1180; -; 1.
DR InterPro; IPR006048; A-amylase/branching_C.
DR InterPro; IPR031319; A-amylase_C.
DR InterPro; IPR006046; Alpha_amylase.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR002044; CBM_fam20.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02806; Alpha-amylase_C; 1.
DR Pfam; PF00686; CBM_20; 1.
DR PRINTS; PR00110; ALPHAAMYLASE.
DR SMART; SM00642; Aamy; 1.
DR SMART; SM00632; Aamy_C; 1.
DR SMART; SM01065; CBM_2; 1.
DR SUPFAM; SSF49452; SSF49452; 1.
DR SUPFAM; SSF51445; SSF51445; 1.
DR PROSITE; PS51166; CBM20; 1.
PE 2: Evidence at transcript level;
KW Calcium; Carbohydrate metabolism; Glycosidase; Hydrolase; Metal-binding;
KW Signal.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..569
FT /note="Alpha-amylase"
FT /id="PRO_0000001344"
FT DOMAIN 468..569
FT /note="CBM20"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00594"
FT ACT_SITE 205
FT /note="Nucleophile"
FT /evidence="ECO:0000250"
FT ACT_SITE 232
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT BINDING 120
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 166
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 175
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 209
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT SITE 296
FT /note="Transition state stabilizer"
FT /evidence="ECO:0000250"
SQ SEQUENCE 569 AA; 60637 MW; 14CA5B1D56720043 CRC64;
MARKTVAAAL ALVAGAAVAV TGNAPAQAVP PGEKDVTAVM FEWNFASVAR ECTDRLGPAG
YGYVQVSPPQ EHLQGGQWWT SYQPVSYKIA GRLGDRTAFK NMIDTCHAAG VKVVADSVIN
HMANGSGTGT GGTSFSKYDY PGLYSGSDMD DCRATISNYQ DRANVQNCEL VQLPDLDTGE
DHVRGKIAGY LNDLASLGVD GFRIDAAKHM PAADLANIKS RLTNPNVFWK LEAIHGAGEA
VSPSEYLGSG DVQEFRYARD LKRVLQGEKL SYLKNFGEAW GHMPSGQSGV FVDNHDTERG
GDTLSYKDGA NYTLASVFML AWPYGSPDVH SGYEWTDKDA GPPNNGQVNA CYTDGWKCQH
AWREISSMVA FRNTARGQAV TNWWDNGNNA IAFGRGSKAY VAINHETSAL TRTFQTSLPA
GSYCDVQSNT PVTVNSSGQF TATLAANTAV ALHVNATGCG STPTTPPTTP PATSGASFNV
TATTVVGQNI YVTGNRAELG NWAPASALKL DPATYPVWKL TVGLPAGTSF EYKYIRKDAA
GNVTWESGAN RTATVPASGQ LVLNDTFRS