HARB_PYRAB
ID HARB_PYRAB Reviewed; 67 AA.
AC Q9V1F5; G8ZGH6;
DT 26-SEP-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 98.
DE RecName: Full=Archaeal histone B;
DE AltName: Full=Archaeal histone A2;
GN OrderedLocusNames=PYRAB04720; ORFNames=PAB3117;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- FUNCTION: Binds and compact DNA (95 to 150 base pairs) to form
CC nucleosome-like structures that contain positive DNA supercoils.
CC Increases the resistance of DNA to thermal denaturation (in vitro).
CC {ECO:0000250|UniProtKB:P19267}.
CC -!- SUBUNIT: Homodimer or heterodimer with another histone. Dimers then
CC assemble into higher oligomers, with the DNA wrapped around the protein
CC core (By similarity). {ECO:0000250|UniProtKB:P19267}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}. Chromosome
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the archaeal histone HMF family. {ECO:0000305}.
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DR EMBL; AJ248284; CAB49394.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE69855.1; -; Genomic_DNA.
DR PIR; C75164; C75164.
DR RefSeq; WP_010867596.1; NC_000868.1.
DR AlphaFoldDB; Q9V1F5; -.
DR SMR; Q9V1F5; -.
DR STRING; 272844.PAB3117; -.
DR EnsemblBacteria; CAB49394; CAB49394; PAB3117.
DR GeneID; 1495368; -.
DR KEGG; pab:PAB3117; -.
DR PATRIC; fig|272844.11.peg.499; -.
DR eggNOG; arCOG02144; Archaea.
DR HOGENOM; CLU_192667_0_0_2; -.
DR OMA; ELPVAPC; -.
DR PhylomeDB; Q9V1F5; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR Gene3D; 1.10.20.10; -; 1.
DR InterPro; IPR003958; CBFA_NFYB_domain.
DR InterPro; IPR009072; Histone-fold.
DR Pfam; PF00808; CBFD_NFYB_HMF; 1.
DR SUPFAM; SSF47113; SSF47113; 1.
PE 3: Inferred from homology;
KW Chromosome; Cytoplasm; DNA-binding.
FT CHAIN 1..67
FT /note="Archaeal histone B"
FT /id="PRO_0000154999"
FT REGION 20..22
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250|UniProtKB:P19267"
FT REGION 54..57
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250|UniProtKB:P19267"
SQ SEQUENCE 67 AA; 7338 MW; 00B8DB475FAFE54A CRC64;
MAELPIAPVD RLIRKAGAQR VSEKAAKLLA EHLEEKALEI AKKAVDLAKH AGRKTVKVED
IKLAIRS