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HBSAG_HBVA3
ID   HBSAG_HBVA3             Reviewed;         400 AA.
AC   P03141;
DT   21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 3.
DT   29-SEP-2021, entry version 87.
DE   RecName: Full=Large envelope protein {ECO:0000255|HAMAP-Rule:MF_04075};
DE   AltName: Full=L glycoprotein {ECO:0000255|HAMAP-Rule:MF_04075};
DE   AltName: Full=L-HBsAg {ECO:0000255|HAMAP-Rule:MF_04075};
DE            Short=LHB {ECO:0000255|HAMAP-Rule:MF_04075};
DE   AltName: Full=Large S protein {ECO:0000255|HAMAP-Rule:MF_04075};
DE   AltName: Full=Large surface protein {ECO:0000255|HAMAP-Rule:MF_04075};
DE   AltName: Full=Major surface antigen {ECO:0000255|HAMAP-Rule:MF_04075};
GN   Name=S {ECO:0000255|HAMAP-Rule:MF_04075};
OS   Hepatitis B virus genotype A2 subtype adw2 (strain Rutter 1979) (HBV-A).
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Blubervirales; Hepadnaviridae; Orthohepadnavirus.
OX   NCBI_TaxID=480116;
OH   NCBI_TaxID=9606; Homo sapiens (Human).
OH   NCBI_TaxID=9598; Pan troglodytes (Chimpanzee).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA   Valenzuela P., Quiroga M., Zaldivar J., Gray P., Rutter W.J.;
RT   "The nucleotide sequence of the hepatitis B viral genome and the
RT   identification of the major viral genes.";
RL   (In) Field B.N., Jaenisch R., Fox C.F. (eds.);
RL   Animal virus genetics, pp.57-70, Academic Press, New York (1980).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 175-400.
RX   PubMed=471053; DOI=10.1038/280815a0;
RA   Valenzuela P., Gray P., Quiroga M., Zaldivar J., Goodman H.M., Rutter W.J.;
RT   "Nucleotide sequence of the gene coding for the major protein of hepatitis
RT   B virus surface antigen.";
RL   Nature 280:815-819(1979).
RN   [3]
RP   RECOMBINANT VACCINE.
RX   PubMed=6150233; DOI=10.1016/s0140-6736(84)92740-5;
RA   Jilg W., Lorbeer B., Schmidt M., Wilske B., Zoulek G., Deinhardt F.;
RT   "Clinical evaluation of a recombinant hepatitis B vaccine.";
RL   Lancet 2:1174-1175(1984).
RN   [4]
RP   CHARACTERIZATION.
RC   STRAIN=Isolate clinical;
RX   PubMed=6492255; DOI=10.1128/jvi.52.2.396-402.1984;
RA   Heermann K.H., Goldmann U., Schwartz W., Seyffarth T., Baumgarten H.,
RA   Gerlich W.H.;
RT   "Large surface proteins of hepatitis B virus containing the pre-s
RT   sequence.";
RL   J. Virol. 52:396-402(1984).
RN   [5]
RP   FUNCTION.
RX   PubMed=2041095; DOI=10.1128/jvi.65.7.3813-3820.1991;
RA   Bruss V., Ganem D.;
RT   "Mutational analysis of hepatitis B surface antigen particle assembly and
RT   secretion.";
RL   J. Virol. 65:3813-3820(1991).
RN   [6]
RP   TRANSMEMBRANE TOPOLOGY.
RX   PubMed=8194518; DOI=10.1002/j.1460-2075.1994.tb06509.x;
RA   Bruss V., Lu X., Thomssen R., Gerlich W.H.;
RT   "Post-translational alterations in transmembrane topology of the hepatitis
RT   B virus large envelope protein.";
RL   EMBO J. 13:2273-2279(1994).
RN   [7]
RP   INTERACTION WITH HDV ANTIGENS (ISOFORM S).
RX   PubMed=8289368; DOI=10.1128/jvi.68.2.646-653.1994;
RA   Chang M.F., Chen C.J., Chang S.C.;
RT   "Mutational analysis of delta antigen: effect on assembly and replication
RT   of hepatitis delta virus.";
RL   J. Virol. 68:646-653(1994).
RN   [8]
RP   FUNCTION (ISOFORM M).
RX   PubMed=9050863; DOI=10.1073/pnas.94.5.1822;
RA   Mehta A., Lu X., Block T.M., Blumberg B.S., Dwek R.A.;
RT   "Hepatitis B virus (HBV) envelope glycoproteins vary drastically in their
RT   sensitivity to glycan processing: evidence that alteration of a single N-
RT   linked glycosylation site can regulate HBV secretion.";
RL   Proc. Natl. Acad. Sci. U.S.A. 94:1822-1827(1997).
RN   [9]
RP   FUNCTION OF GLYCOSYLATION.
RX   PubMed=9122203; DOI=10.1073/pnas.94.6.2380;
RA   Lu X., Mehta A., Dadmarz M., Dwek R., Blumberg B.S., Block T.M.;
RT   "Aberrant trafficking of hepatitis B virus glycoproteins in cells in which
RT   N-glycan processing is inhibited.";
RL   Proc. Natl. Acad. Sci. U.S.A. 94:2380-2385(1997).
RN   [10]
RP   INTERACTION WITH HOST CANX (ISOFORM L).
RX   PubMed=9188622; DOI=10.1128/jvi.71.7.5487-5494.1997;
RA   Xu Z., Bruss V., Yen T.S.;
RT   "Formation of intracellular particles by hepatitis B virus large surface
RT   protein.";
RL   J. Virol. 71:5487-5494(1997).
RN   [11]
RP   REVIEW.
RX   PubMed=8957666; DOI=10.1159/000150471;
RA   Bruss V., Gerhardt E., Vieluf K., Wunderlich G.;
RT   "Functions of the large hepatitis B virus surface protein in viral particle
RT   morphogenesis.";
RL   Intervirology 39:23-31(1996).
RN   [12]
RP   REVIEW.
RX   PubMed=9498079; DOI=10.1007/978-1-4615-5383-0_20;
RA   Block T.M., Lu X., Mehta A., Park J., Blumberg B.S., Dwek R.;
RT   "Role of glycan processing in hepatitis B virus envelope protein
RT   trafficking.";
RL   Adv. Exp. Med. Biol. 435:207-216(1998).
RN   [13]
RP   INTERACTION WITH HOST CANX (ISOFORM M).
RX   PubMed=9420286; DOI=10.1128/jvi.72.1.778-782.1998;
RA   Werr M., Prange R.;
RT   "Role for calnexin and N-linked glycosylation in the assembly and secretion
RT   of hepatitis B virus middle envelope protein particles.";
RL   J. Virol. 72:778-782(1998).
RN   [14]
RP   MYRISTOYLATION AT GLY-2.
RX   PubMed=11350599; DOI=10.1034/j.1399-3011.2001.00848.x;
RA   De Falco S., Ruvo M., Verdoliva A., Scarallo A., Raimondo D., Raucci A.,
RA   Fassina G.;
RT   "N-terminal myristylation of HBV preS1 domain enhances receptor
RT   recognition.";
RL   J. Pept. Res. 57:390-400(2001).
RN   [15]
RP   REVIEW.
RX   PubMed=15567498; DOI=10.1016/j.virusres.2004.08.016;
RA   Bruss V.;
RT   "Envelopment of the hepatitis B virus nucleocapsid.";
RL   Virus Res. 106:199-209(2004).
RN   [16]
RP   REVIEW.
RX   PubMed=16863502; DOI=10.1111/j.1349-7006.2006.00235.x;
RA   Wang H.C., Huang W., Lai M.D., Su I.J.;
RT   "Hepatitis B virus pre-S mutants, endoplasmic reticulum stress and
RT   hepatocarcinogenesis.";
RL   Cancer Sci. 97:683-688(2006).
RN   [17]
RP   INTERACTION WITH ISOFORM S (ISOFORM L), INTERACTION WITH THE CAPSID
RP   PROTEIN, AND INTERACTION WITH ISOFORM L (ISOFORM S).
RX   PubMed=31700077; DOI=10.1038/s41598-019-52824-z;
RA   Pastor F., Herrscher C., Patient R., Eymieux S., Moreau A.,
RA   Burlaud-Gaillard J., Seigneuret F., de Rocquigny H., Roingeard P.,
RA   Hourioux C.;
RT   "Direct interaction between the hepatitis B virus core and envelope
RT   proteins analyzed in a cellular context.";
RL   Sci. Rep. 9:16178-16178(2019).
CC   -!- FUNCTION: The large envelope protein exists in two topological
CC       conformations, one which is termed 'external' or Le-HBsAg and the other
CC       'internal' or Li-HBsAg. In its external conformation the protein
CC       attaches the virus to cell receptors and thereby initiating infection.
CC       This interaction determines the species specificity and liver tropism.
CC       This attachment induces virion internalization predominantly through
CC       caveolin-mediated endocytosis. The large envelope protein also assures
CC       fusion between virion membrane and endosomal membrane. In its internal
CC       conformation the protein plays a role in virion morphogenesis and
CC       mediates the contact with the nucleocapsid like a matrix protein.
CC       {ECO:0000255|HAMAP-Rule:MF_04075}.
CC   -!- FUNCTION: The middle envelope protein plays an important role in the
CC       budding of the virion. It is involved in the induction of budding in a
CC       nucleocapsid independent way. In this process the majority of envelope
CC       proteins bud to form subviral lipoprotein particles of 22 nm of
CC       diameter that do not contain a nucleocapsid. {ECO:0000255|HAMAP-
CC       Rule:MF_04075}.
CC   -!- SUBUNIT: [Isoform L]: In its internal form (Li-HBsAg), interacts with
CC       the capsid protein and with the isoform S (PubMed:31700077). Interacts
CC       with host chaperone CANX (PubMed:9188622).
CC       {ECO:0000269|PubMed:31700077, ECO:0000269|PubMed:9188622}.
CC   -!- SUBUNIT: [Isoform M]: Associates with host chaperone CANX through its
CC       pre-S2 N glycan; this association may be essential for isoform M proper
CC       secretion. {ECO:0000269|PubMed:9420286}.
CC   -!- SUBUNIT: [Isoform S]: Interacts with isoform L (PubMed:31700077).
CC       Interacts with the antigens of satellite virus HDV (HDVAgs); this
CC       interaction is required for encapsidation of HDV genomic RNA
CC       (PubMed:8289368). {ECO:0000269|PubMed:31700077,
CC       ECO:0000269|PubMed:8289368}.
CC   -!- SUBCELLULAR LOCATION: Virion membrane {ECO:0000255|HAMAP-
CC       Rule:MF_04075}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing, Alternative initiation; Named isoforms=3;
CC       Name=L; Synonyms=Large envelope protein, LHB, L-HBsAg;
CC         IsoId=P03141-1; Sequence=Displayed;
CC       Name=M; Synonyms=Middle envelope protein, MHB, M-HBsAg;
CC         IsoId=P03141-2; Sequence=VSP_030415;
CC       Name=S; Synonyms=Small envelope protein, SHB, S-HBsAg;
CC         IsoId=P03141-3; Sequence=VSP_030414;
CC   -!- DOMAIN: The large envelope protein is synthesized with the pre-S region
CC       at the cytosolic side of the endoplasmic reticulum and, hence will be
CC       within the virion after budding. Therefore the pre-S region is not N-
CC       glycosylated. Later a post-translational translocation of N-terminal
CC       pre-S and TM1 domains occur in about 50% of proteins at the virion
CC       surface. These molecules change their topology by an unknown mechanism,
CC       resulting in exposure of pre-S region at virion surface. For isoform M
CC       in contrast, the pre-S2 region is translocated cotranslationally to the
CC       endoplasmic reticulum lumen and is N-glycosylated. {ECO:0000255|HAMAP-
CC       Rule:MF_04075}.
CC   -!- PTM: Isoform M is N-terminally acetylated by host at a ratio of 90%,
CC       and N-glycosylated by host at the pre-S2 region.
CC       {ECO:0000250|UniProtKB:P03138, ECO:0000255|HAMAP-Rule:MF_04075}.
CC   -!- PTM: Myristoylated. {ECO:0000255|HAMAP-Rule:MF_04075,
CC       ECO:0000269|PubMed:11350599}.
CC   -!- BIOTECHNOLOGY: Systematic vaccination of individuals at risk of
CC       exposure to the virus has been the main method of controlling the
CC       morbidity and mortality associated with hepatitis B. The first
CC       hepatitis B vaccine was manufactured by the purification and
CC       inactivation of HBsAg obtained from the plasma of chronic hepatitis B
CC       virus carriers. The vaccine is now produced by recombinant DNA
CC       techniques and expression of the S isoform in yeast cells. The pre-S
CC       region do not seem to induce strong enough antigenic response.
CC   -!- SIMILARITY: Belongs to the orthohepadnavirus major surface antigen
CC       family. {ECO:0000255|HAMAP-Rule:MF_04075}.
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DR   EMBL; X02763; CAA26539.1; -; Genomic_DNA.
DR   EMBL; J02205; AAA45524.1; -; Genomic_RNA.
DR   PIR; A03706; SAVLVD.
DR   ABCD; P03141; 3 sequenced antibodies.
DR   Proteomes; UP000008766; Genome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-UniRule.
DR   GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0075513; P:caveolin-mediated endocytosis of virus by host cell; IEA:UniProtKB-KW.
DR   GO; GO:0039654; P:fusion of virus membrane with host endosome membrane; IEA:UniProtKB-KW.
DR   GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_04075; HBV_HBSAG; 1.
DR   InterPro; IPR000349; HBV_HBSAG.
DR   Pfam; PF00695; vMSA; 1.
PE   1: Evidence at protein level;
KW   Acetylation; Alternative initiation; Alternative splicing;
KW   Caveolin-mediated endocytosis of virus by host;
KW   Fusion of virus membrane with host endosomal membrane;
KW   Fusion of virus membrane with host membrane; Glycoprotein;
KW   Host-virus interaction; Lipoprotein; Membrane; Myristate; Transmembrane;
KW   Transmembrane helix; Viral attachment to host cell;
KW   Viral penetration into host cytoplasm; Virion; Virus endocytosis by host;
KW   Virus entry into host cell.
FT   INIT_MET        1
FT                   /note="Removed; by host"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   CHAIN           2..400
FT                   /note="Large envelope protein"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT                   /id="PRO_0000038087"
FT   TOPO_DOM        2..253
FT                   /note="Intravirion; in internal conformation"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TOPO_DOM        2..181
FT                   /note="Virion surface; in external conformation"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TRANSMEM        182..202
FT                   /note="Helical; Name=TM1; Note=In external conformation"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TOPO_DOM        203..253
FT                   /note="Intravirion; in external conformation"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TRANSMEM        254..274
FT                   /note="Helical; Name=TM2"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TOPO_DOM        275..348
FT                   /note="Virion surface"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TRANSMEM        349..369
FT                   /note="Helical"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TOPO_DOM        370..375
FT                   /note="Intravirion"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TRANSMEM        376..398
FT                   /note="Helical; Name=TM3"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   TOPO_DOM        399..400
FT                   /note="Virion surface"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   REGION          1..20
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2..174
FT                   /note="Pre-S"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   REGION          2..119
FT                   /note="Pre-S1"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   REGION          89..115
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          120..174
FT                   /note="Pre-S2"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   COMPBIAS        89..108
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   LIPID           2
FT                   /note="N-myristoyl glycine; by host"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   CARBOHYD        320
FT                   /note="N-linked (GlcNAc...) asparagine; by host; partial"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_04075"
FT   VAR_SEQ         1..174
FT                   /note="Missing (in isoform S)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_030414"
FT   VAR_SEQ         1..119
FT                   /note="Missing (in isoform M)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_030415"
FT   MOD_RES         P03141-2:1
FT                   /note="N-acetylmethionine"
FT                   /evidence="ECO:0000305"
FT   CARBOHYD        P03141-2:4
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   400 AA;  43705 MW;  57356B6293872BC5 CRC64;
     MGGWSSKPRK GMGTNLSVPN PLGFFPDHQL DPAFGANSNN PDWDFNPVKD DWPAANQVGV
     GAFGPRLTPP HGGILGWSPQ AQGILTTVST IPPPASTNRQ SGRQPTPISP PLRDSHPQAM
     QWNSTAFHQT LQDPRVRGLY LPAGGSSSGT VNPAPNIASH ISSISARTGD PVTNMENITS
     GFLGPLLVLQ AGFFLLTRIL TIPQSLDSWW TSLNFLGGSP VCLGQNSQSP TSNHSPTSCP
     PICPGYRWMC LRRFIIFLFI LLLCLIFLLV LLDYQGMLPV CPLIPGSTTT STGPCKTCTT
     PAQGNSMFPS CCCTKPTDGN CTCIPIPSSW AFAKYLWEWA SVRFSWLSLL VPFVQWFVGL
     SPTVWLSAIW MMWYWGPSLY SIVSPFIPLL PIFFCLWVYI
 
 
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