HDA_YERPE
ID HDA_YERPE Reviewed; 239 AA.
AC Q8ZCC1; Q0WCJ7; Q74SC4; Q7CJJ7;
DT 04-JAN-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=DnaA regulatory inactivator Hda {ECO:0000255|HAMAP-Rule:MF_01158};
GN Name=hda {ECO:0000255|HAMAP-Rule:MF_01158}; Synonyms=dnaA1;
GN OrderedLocusNames=YPO3071, y1410, YP_2693;
OS Yersinia pestis.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=632;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CO-92 / Biovar Orientalis;
RX PubMed=11586360; DOI=10.1038/35097083;
RA Parkhill J., Wren B.W., Thomson N.R., Titball R.W., Holden M.T.G.,
RA Prentice M.B., Sebaihia M., James K.D., Churcher C.M., Mungall K.L.,
RA Baker S., Basham D., Bentley S.D., Brooks K., Cerdeno-Tarraga A.-M.,
RA Chillingworth T., Cronin A., Davies R.M., Davis P., Dougan G., Feltwell T.,
RA Hamlin N., Holroyd S., Jagels K., Karlyshev A.V., Leather S., Moule S.,
RA Oyston P.C.F., Quail M.A., Rutherford K.M., Simmonds M., Skelton J.,
RA Stevens K., Whitehead S., Barrell B.G.;
RT "Genome sequence of Yersinia pestis, the causative agent of plague.";
RL Nature 413:523-527(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KIM10+ / Biovar Mediaevalis;
RX PubMed=12142430; DOI=10.1128/jb.184.16.4601-4611.2002;
RA Deng W., Burland V., Plunkett G. III, Boutin A., Mayhew G.F., Liss P.,
RA Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D.,
RA Lindler L.E., Brubaker R.R., Plano G.V., Straley S.C., McDonough K.A.,
RA Nilles M.L., Matson J.S., Blattner F.R., Perry R.D.;
RT "Genome sequence of Yersinia pestis KIM.";
RL J. Bacteriol. 184:4601-4611(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=91001 / Biovar Mediaevalis;
RX PubMed=15368893; DOI=10.1093/dnares/11.3.179;
RA Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D.,
RA Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L.,
RA Dai R., Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H.,
RA Wang J., Huang P., Yang R.;
RT "Complete genome sequence of Yersinia pestis strain 91001, an isolate
RT avirulent to humans.";
RL DNA Res. 11:179-197(2004).
CC -!- FUNCTION: Mediates the interaction of DNA replication initiator protein
CC DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates
CC hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for
CC reinitiation, a process called regulatory inhibition of DnaA or RIDA
CC (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: The active form seems to be an ADP-bound monomer. Forms the
CC RIDA complex (regulatory inactivation of DnaA) of ATP-DnaA, ADP-Hda and
CC the DNA-loaded beta sliding clamp (dnaN). {ECO:0000255|HAMAP-
CC Rule:MF_01158}.
CC -!- SIMILARITY: Belongs to the DnaA family. HdA subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01158}.
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DR EMBL; AL590842; CAL21673.1; -; Genomic_DNA.
DR EMBL; AE009952; AAM84982.1; -; Genomic_DNA.
DR EMBL; AE017042; AAS62883.1; -; Genomic_DNA.
DR PIR; AF0373; AF0373.
DR RefSeq; WP_002208566.1; NZ_NYMQ01000136.1.
DR RefSeq; YP_002347991.1; NC_003143.1.
DR AlphaFoldDB; Q8ZCC1; -.
DR SMR; Q8ZCC1; -.
DR STRING; 214092.YPO3071; -.
DR PaxDb; Q8ZCC1; -.
DR DNASU; 1146357; -.
DR EnsemblBacteria; AAM84982; AAM84982; y1410.
DR EnsemblBacteria; AAS62883; AAS62883; YP_2693.
DR KEGG; ype:YPO3071; -.
DR KEGG; ypk:y1410; -.
DR KEGG; ypm:YP_2693; -.
DR PATRIC; fig|1028802.3.peg.1589; -.
DR eggNOG; COG0593; Bacteria.
DR HOGENOM; CLU_072265_1_1_6; -.
DR OMA; DWGQIYR; -.
DR Proteomes; UP000000815; Chromosome.
DR Proteomes; UP000001019; Chromosome.
DR Proteomes; UP000002490; Chromosome.
DR GO; GO:0006260; P:DNA replication; IBA:GO_Central.
DR GO; GO:0006270; P:DNA replication initiation; IBA:GO_Central.
DR GO; GO:0032297; P:negative regulation of DNA-templated DNA replication initiation; IBA:GO_Central.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01158; Hda; 1.
DR InterPro; IPR020591; Chromosome_initiator_DnaA-like.
DR InterPro; IPR013317; DnaA.
DR InterPro; IPR017788; Hda.
DR InterPro; IPR022864; Hda_Enterobact.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00308; Bac_DnaA; 1.
DR PRINTS; PR00051; DNAA.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR03420; DnaA_homol_Hda; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA replication inhibitor; Reference proteome.
FT CHAIN 1..239
FT /note="DnaA regulatory inactivator Hda"
FT /id="PRO_0000114322"
SQ SEQUENCE 239 AA; 27143 MW; C1D2C204352E4498 CRC64;
MLVEVLLNTP AQLSLPLYLP DDETFASFYP GENPSLLAAI QSAVHQPHGS YIYFWSREGG
GRSHLLHAAC AELSQQGEAV GYVPLDKRAY FIPEVLEGME QLALVCIDNI ECIAGDEQWE
MAMFNLYNRI VETGRTRLLI TGDRPPRQLN LGLPDLASRL DWGQIYKLQP LSDDEKLQAL
QLRAKLRGFE LPEDVGRFLL KRLDREMRTL FMTLDQLDRA SITAQRKLTI PFVKEILSL