HELT_DANRE
ID HELT_DANRE Reviewed; 270 AA.
AC Q6QB00; Q568X6;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Hairy and enhancer of split-related protein helt;
DE AltName: Full=HES/HEY-like transcription factor;
GN Name=helt; ORFNames=zgc:109704;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Gajewski M., Sieger D., Tautz D.;
RT "Her/Hey-related shows highly restricted expression in the developing brain
RT of the zebrafish embryo.";
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Olfactory epithelium;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcriptional repressor which binds preferentially to the
CC canonical E box sequence 5'-CACGCG-3'. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00380,
CC ECO:0000255|PROSITE-ProRule:PRU00981}.
CC -!- SIMILARITY: Belongs to the HEY family. {ECO:0000305}.
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DR EMBL; AY549496; AAS55698.1; -; mRNA.
DR EMBL; BC092667; AAH92667.2; -; mRNA.
DR RefSeq; NP_996948.1; NM_207065.2.
DR AlphaFoldDB; Q6QB00; -.
DR SMR; Q6QB00; -.
DR STRING; 7955.ENSDARP00000073348; -.
DR PaxDb; Q6QB00; -.
DR Ensembl; ENSDART00000078889; ENSDARP00000073348; ENSDARG00000056400.
DR GeneID; 404275; -.
DR KEGG; dre:404275; -.
DR CTD; 391723; -.
DR ZFIN; ZDB-GENE-040824-6; helt.
DR eggNOG; KOG4304; Eukaryota.
DR GeneTree; ENSGT00940000160388; -.
DR HOGENOM; CLU_084227_0_0_1; -.
DR InParanoid; Q6QB00; -.
DR OMA; FAWPHGA; -.
DR OrthoDB; 1054305at2759; -.
DR PhylomeDB; Q6QB00; -.
DR TreeFam; TF323617; -.
DR PRO; PR:Q6QB00; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 1.
DR Bgee; ENSDARG00000056400; Expressed in dorsal thalamus and 11 other tissues.
DR ExpressionAtlas; Q6QB00; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0009952; P:anterior/posterior pattern specification; IBA:GO_Central.
DR GO; GO:0050767; P:regulation of neurogenesis; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR003650; Orange_dom.
DR Pfam; PF07527; Hairy_orange; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
DR PROSITE; PS51054; ORANGE; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repressor; Transcription;
KW Transcription regulation.
FT CHAIN 1..270
FT /note="Hairy and enhancer of split-related protein helt"
FT /id="PRO_0000349385"
FT DOMAIN 59..114
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT DOMAIN 136..171
FT /note="Orange"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00380"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 270 AA; 30861 MW; A9D484CAB96B6018 CRC64;
MNARALYKRP PPVSSSQSEA SGKRRTRTLD ALGFDNYIIC NYRLVFYEMM ASKMKDRKKT
PVSHKVIEKR RRDRINRCLN ELGKTVPMAL AKQNSGKLEK AEILEMTVQY LRALHSADFP
RGREKGELLT EFANYFHYGY HECMKNLVHY LTTVERMETK DTKYARILAF LQSKVVTEPV
FGSLGTISPD PTDLLCQLEY QSPSPTESVF QQSPPGHFSW HSSTRSPTLA YPAMSQHSGY
LSPVQGLDHH YMNFIGHNAF SLHNAQHAAL