HEM32_STRCO
ID HEM32_STRCO Reviewed; 313 AA.
AC Q9KY00;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 124.
DE RecName: Full=Porphobilinogen deaminase 2;
DE Short=PBG 2;
DE EC=2.5.1.61;
DE AltName: Full=Hydroxymethylbilane synthase 2;
DE Short=HMBS 2;
DE AltName: Full=Pre-uroporphyrinogen synthase 2;
GN Name=hemC2; OrderedLocusNames=SCO7343; ORFNames=SC4G10.22c;
OS Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces; Streptomyces albidoflavus group.
OX NCBI_TaxID=100226;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-471 / A3(2) / M145;
RX PubMed=12000953; DOI=10.1038/417141a;
RA Bentley S.D., Chater K.F., Cerdeno-Tarraga A.-M., Challis G.L.,
RA Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D.,
RA Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A.,
RA Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S., Huang C.-H.,
RA Kieser T., Larke L., Murphy L.D., Oliver K., O'Neil S., Rabbinowitsch E.,
RA Rajandream M.A., Rutherford K.M., Rutter S., Seeger K., Saunders D.,
RA Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A.,
RA Woodward J.R., Barrell B.G., Parkhill J., Hopwood D.A.;
RT "Complete genome sequence of the model actinomycete Streptomyces coelicolor
RT A3(2).";
RL Nature 417:141-147(2002).
CC -!- FUNCTION: Tetrapolymerization of the monopyrrole PBG into the
CC hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
CC {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4(+);
CC Xref=Rhea:RHEA:13185, ChEBI:CHEBI:15377, ChEBI:CHEBI:28938,
CC ChEBI:CHEBI:57845, ChEBI:CHEBI:58126; EC=2.5.1.61;
CC -!- COFACTOR:
CC Name=dipyrromethane; Xref=ChEBI:CHEBI:60342; Evidence={ECO:0000250};
CC Note=Binds 1 dipyrromethane group covalently. {ECO:0000250};
CC -!- PATHWAY: Porphyrin-containing compound metabolism; protoporphyrin-IX
CC biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 2/4.
CC -!- SUBUNIT: Monomer. {ECO:0000250}.
CC -!- MISCELLANEOUS: The porphobilinogen subunits are added to the
CC dipyrromethane group. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the HMBS family. {ECO:0000305}.
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DR EMBL; AL939131; CAB92889.1; -; Genomic_DNA.
DR RefSeq; NP_631397.1; NC_003888.3.
DR RefSeq; WP_003971798.1; NC_003888.3.
DR AlphaFoldDB; Q9KY00; -.
DR SMR; Q9KY00; -.
DR STRING; 100226.SCO7343; -.
DR GeneID; 1102781; -.
DR KEGG; sco:SCO7343; -.
DR PATRIC; fig|100226.15.peg.7447; -.
DR eggNOG; COG0181; Bacteria.
DR HOGENOM; CLU_019704_0_2_11; -.
DR InParanoid; Q9KY00; -.
DR OMA; NAHEWAG; -.
DR PhylomeDB; Q9KY00; -.
DR UniPathway; UPA00251; UER00319.
DR Proteomes; UP000001973; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0004418; F:hydroxymethylbilane synthase activity; IBA:GO_Central.
DR GO; GO:0006783; P:heme biosynthetic process; IBA:GO_Central.
DR GO; GO:0018160; P:peptidyl-pyrromethane cofactor linkage; IEA:InterPro.
DR GO; GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.30.160.40; -; 1.
DR HAMAP; MF_00260; Porphobil_deam; 1.
DR InterPro; IPR000860; HemC.
DR InterPro; IPR022419; Porphobilin_deaminase_cofac_BS.
DR InterPro; IPR022417; Porphobilin_deaminase_N.
DR InterPro; IPR022418; Porphobilinogen_deaminase_C.
DR InterPro; IPR036803; Porphobilinogen_deaminase_C_sf.
DR PANTHER; PTHR11557; PTHR11557; 1.
DR Pfam; PF01379; Porphobil_deam; 1.
DR Pfam; PF03900; Porphobil_deamC; 1.
DR PIRSF; PIRSF001438; 4pyrrol_synth_OHMeBilane_synth; 1.
DR PRINTS; PR00151; PORPHBDMNASE.
DR SUPFAM; SSF54782; SSF54782; 1.
DR TIGRFAMs; TIGR00212; hemC; 1.
DR PROSITE; PS00533; PORPHOBILINOGEN_DEAM; 1.
PE 3: Inferred from homology;
KW Porphyrin biosynthesis; Reference proteome; Transferase.
FT CHAIN 1..313
FT /note="Porphobilinogen deaminase 2"
FT /id="PRO_0000143000"
FT MOD_RES 246
FT /note="S-(dipyrrolylmethanemethyl)cysteine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 313 AA; 33413 MW; 2E1D225E91BDB3DF CRC64;
MRMSAPELIR IVSRDSPMAL AQVERVRAEL AALHPGVRTE VVPVRTTGDK WLGDLSQVEG
KGAFTKEVDA ALLSGEADLA VHCVKDVPAD RPLPAGTVFA AFLKRDDVRD ALVHPDGLTL
DELPDGTRVG TSSVRRVAQL AATHPHLRCV PFRGNANRRL AKLAAGEADA LLLAVSGLER
IGRTDVISEV LSTETMMPPI GAGILALQCR EGDRALIEAV SALGDPRTHR EATAERMFLH
VLQGHCNSPI AGHAQVDRSG ELSLRACVFT PDGKVRLNAH EWAGRLDPAT LGTSVAVALL
RQGAREIIDG IAH