HEMA_PHODV
ID HEMA_PHODV Reviewed; 607 AA.
AC P28882;
DT 01-DEC-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 2.
DT 23-FEB-2022, entry version 95.
DE RecName: Full=Hemagglutinin glycoprotein;
GN Name=H;
OS Phocine distemper virus (PDV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae;
OC Morbillivirus.
OX NCBI_TaxID=11240;
OH NCBI_TaxID=9709; Phocidae (true seals).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC STRAIN=Isolate DK88-4A;
RX PubMed=1765768; DOI=10.1099/0022-1317-72-12-2959;
RA Koevamees J., Blixenkrone-Moeller M., Sharma B., Oervell C., Norrby E.;
RT "The nucleotide sequence and deduced amino acid composition of the
RT haemagglutinin and fusion proteins of the morbillivirus phocid distemper
RT virus.";
RL J. Gen. Virol. 72:2959-2966(1991).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC STRAIN=Ulster/88;
RX PubMed=1588321; DOI=10.1099/0022-1317-73-5-1189;
RA Curran M.D., O'Loan D., Kennedy S., Rima B.K.;
RT "Molecular characterization of phocine distemper virus: gene order and
RT sequence of the gene encoding the attachment (H) protein.";
RL J. Gen. Virol. 73:1189-1194(1992).
RN [3]
RP PARTIAL NUCLEOTIDE SEQUENCE.
RC STRAIN=Ulster/88;
RX PubMed=2264246;
RA Curran M.D., O'Loan D., Rima B.K., Kennedy S.;
RT "Nucleotide sequence analysis of phocine distemper virus reveals its
RT distinctness from canine distemper virus.";
RL Vet. Rec. 127:430-431(1990).
CC -!- FUNCTION: Attaches the virus to cell receptors and thereby initiating
CC infection. Binding of H protein to the receptor induces a
CC conformational change that allows the F protein to trigger virion/cell
CC membranes fusion (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion membrane {ECO:0000305}; Single-pass type
CC II membrane protein {ECO:0000305}. Host membrane; Single-pass type II
CC membrane protein.
CC -!- SIMILARITY: Belongs to the paramyxoviruses hemagglutinin-neuraminidase
CC family. Non-sialidase subfamily. {ECO:0000305}.
CC -!- CAUTION: Morbiliviruses hemagglutinins have no neuraminidase activity.
CC {ECO:0000305}.
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DR EMBL; D10371; BAA01207.1; -; Genomic_RNA.
DR PIR; JQ1535; JQ1535.
DR SMR; P28882; -.
DR GO; GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0046789; F:host cell surface receptor binding; IEA:InterPro.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-KW.
DR InterPro; IPR000665; Hemagglutn/HN.
DR InterPro; IPR036278; Sialidase_sf.
DR Pfam; PF00423; HN; 1.
DR SUPFAM; SSF50939; SSF50939; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Hemagglutinin; Host membrane; Host-virus interaction;
KW Membrane; Signal-anchor; Transmembrane; Transmembrane helix;
KW Viral attachment to host cell; Viral envelope protein; Virion;
KW Virus entry into host cell.
FT CHAIN 1..607
FT /note="Hemagglutinin glycoprotein"
FT /id="PRO_0000142620"
FT TOPO_DOM 1..38
FT /note="Intravirion"
FT /evidence="ECO:0000255"
FT TRANSMEM 39..55
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 56..607
FT /note="Virion surface"
FT /evidence="ECO:0000255"
FT CARBOHYD 149
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 276
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 391
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 422
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 456
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 587
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT VARIANT 160
FT /note="K -> R"
FT VARIANT 304
FT /note="P -> L"
FT VARIANT 379
FT /note="S -> R"
SQ SEQUENCE 607 AA; 68885 MW; 510D54E2A40A0DC8 CRC64;
MFSHQDKVGA FYKNNARANS SKLSLVTDEV EERRSPWFLS ILLILLVGIL ILLTITGIRF
HQVVKSNLEF NKLLIEDMEK TEAVHHQVKD VLTPLFKIIG DEVGLRLPQK LNEIKQFIVQ
KTNFFNPNRE FDFRELHWCI NPPSKVKVNF TQYCEITEFK EATRSVANSI LLLTLYRGRD
DIFPPYKCRG ATTSMGNVFP LAVSLSMSLI SKPSEVINML TAISEGIYGK TYLLVTDDTE
ENFETPEIRV FEIGFINRWL GDMPLFQTTN YRIISNNSNT KICTIAVGEL ALASLCTKES
TILPNLGDEE SQNSVLVVIL GLFGATHMDQ LEEVIPVAHP SIEKIHITNH RGFIKDSVAT
WMVPALALSE QGEQINCLSS ACKRRTYPMC NQTSWEPFGD KRLPSYGRLT LSLDVSTDLS
INVSVAQGPI IFNGDGMDYY EGTLLNSGWL TIPPKNGTIL GLINQASKGD QFIVTPHILT
FAPRESSTDC HLPIQTYQIQ DDDVLLESNL VVLPTQSFEY VVATYDVSRS DHAIVYYVYD
PARTVSYTYP FRLRTKGRPD ILRIECFVWD GHLWCHQFYR FQLDATNSTS VVENLIRIRF
SCDRLDP