HEPA_VZVO
ID HEPA_VZVO Reviewed; 771 AA.
AC Q9J3N6; Q4JQS3; Q4JR32;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 48.
DE RecName: Full=DNA helicase/primase complex-associated protein {ECO:0000255|HAMAP-Rule:MF_04010};
DE Short=HEPA {ECO:0000255|HAMAP-Rule:MF_04010};
DE AltName: Full=Primase-associated factor {ECO:0000255|HAMAP-Rule:MF_04010};
GN ORFNames=ORF52;
OS Varicella-zoster virus (strain Oka vaccine) (HHV-3) (Human herpesvirus 3).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.
OX NCBI_TaxID=341980;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Oka varicella vaccine Biken (V-Oka-Biken);
RX PubMed=10720545; DOI=10.1086/315335;
RA Argaw T., Cohen J.I., Klutch M., Lekstrom K., Yoshikawa T., Asano Y.,
RA Krause P.R.;
RT "Nucleotide sequences that distinguish Oka vaccine from parental Oka and
RT other varicella-zoster virus isolates.";
RL J. Infect. Dis. 181:1153-1157(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Oka varicella vaccine VarilRix (V-Oka-GSK), and
RC Oka varicella vaccine Varivax (V-Oka-Merk);
RX PubMed=18787000; DOI=10.1128/jvi.00777-08;
RA Tillieux S.L., Halsey W.S., Thomas E.S., Voycik J.J., Sathe G.M.,
RA Vassilev V.;
RT "Complete DNA sequences of two oka strain varicella-zoster virus genomes.";
RL J. Virol. 82:11023-11044(2008).
CC -!- FUNCTION: Component of the helicase/primase complex. Unwinds the DNA at
CC the replication forks and generates single-stranded DNA for both
CC leading and lagging strand synthesis. The primase synthesizes short RNA
CC primers on the lagging strand that the polymerase presumably elongates
CC using dNTPs. The primase-associated factor has no known catalytic
CC activity in the complex and may serve to facilitate the formation of
CC the replisome by directly interacting with the origin-binding protein
CC and the polymerase. {ECO:0000255|HAMAP-Rule:MF_04010}.
CC -!- SUBUNIT: Associates with the primase and the helicase to form the
CC helicase-primase complex. Interacts with the origin-binding protein.
CC Interacts with the polymerase catalytic subunit. {ECO:0000255|HAMAP-
CC Rule:MF_04010}.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000255|HAMAP-Rule:MF_04010}.
CC -!- SIMILARITY: Belongs to the herpesviridae HEPA family.
CC {ECO:0000255|HAMAP-Rule:MF_04010}.
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DR EMBL; AF206304; AAF61653.1; -; Genomic_DNA.
DR EMBL; DQ008355; AAY57732.1; -; Genomic_DNA.
DR EMBL; DQ008354; AAY57661.1; -; Genomic_DNA.
DR IntAct; Q9J3N6; 3.
DR MINT; Q9J3N6; -.
DR ChEMBL; CHEMBL4523677; -.
DR PRIDE; Q9J3N6; -.
DR Proteomes; UP000008504; Genome.
DR Proteomes; UP000008506; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0039686; P:bidirectional double-stranded viral DNA replication; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR HAMAP; MF_04010; HSV_HEPA; 1.
DR InterPro; IPR004996; HSV_HEPA.
DR Pfam; PF03324; Herpes_HEPA; 1.
PE 3: Inferred from homology;
KW DNA replication; Host nucleus.
FT CHAIN 1..771
FT /note="DNA helicase/primase complex-associated protein"
FT /id="PRO_0000385139"
FT VARIANT 512
FT /note="T -> A"
SQ SEQUENCE 771 AA; 86337 MW; DBC410E005920722 CRC64;
MDATQITLVR ESGHICAASI YTSWTQSGQL TQNGLSVLYY LLCKNSCGKY VPKFAEITVQ
QEDLCRYSRH GGSVSAATFA SICRAASSAA LDAWPLEPLG NADTWRCLHG TALATLRRVL
GFKSFYSPVT FETDTNTGLL LKTIPDEHAL NNDNTPSTGV LRANFPVAID VSAVSACNAH
TQGTSLAYAR LTALKSNGDT QQQTPLDVEV ITPKAYIRRK YKSTFSPPIE REGQTSDLFN
LEERRLVLSG NRAIVVRVLL PCYFDCLTTD STVTSSLSIL ATYRLWYAAA FGKPGVVRPI
FAYLGPELNP KGEDRDYFCT VGFPGWTTLR TQTPAVESIR TATEMYMETD GLWPVTGIQA
FHYLAPWGQH PPLPPRVQDL IGQIPQDTGH ADATVNWDAG RISTVFKQPV QLQDRWMAKF
DFSAFFPTIY CAMFPMHFRL GKIVLARMRR GMGCLKPALV SFFGGLRHIL PSIYKAIIFI
ANEISLCVEQ TALEQGFAIC TYIKDGFWGI FTDLHTRNVC SDQARCSALN LAAACERAVT
GLLRIQLGLN FTPAMEPVLR VEGVYTHAFT WCTTGSWLWN LQTNTPPDLV GVPWRSQAAR
DLKERLSGLL CTATKIRERI QENCIWDRVL YDIWAGQVVE AARKTYVDFF EHVFDRRYTP
VYWSLQEQNS ETKAIPASYL TYGHMQDKDY KPRQIIMVRN PNPHGPPTVV YWELLPSCAC
IPPIDCAAHL KPLIHTFVTI INHLLDAHND FSSPSLKFTD DPLASYNFLF L