HFQ_DELAS
ID HFQ_DELAS Reviewed; 83 AA.
AC A9BMU8;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=RNA-binding protein Hfq {ECO:0000255|HAMAP-Rule:MF_00436};
GN Name=hfq {ECO:0000255|HAMAP-Rule:MF_00436}; OrderedLocusNames=Daci_5014;
OS Delftia acidovorans (strain DSM 14801 / SPH-1).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Delftia.
OX NCBI_TaxID=398578;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14801 / SPH-1;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Kim E., Schleheck D., Richardson P.;
RT "Complete sequence of Delftia acidovorans DSM 14801 / SPH-1.";
RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA chaperone that binds small regulatory RNA (sRNAs) and
CC mRNAs to facilitate mRNA translational regulation in response to
CC envelope stress, environmental stress and changes in metabolite
CC concentrations. Also binds with high specificity to tRNAs.
CC {ECO:0000255|HAMAP-Rule:MF_00436}.
CC -!- SUBUNIT: Homohexamer. {ECO:0000255|HAMAP-Rule:MF_00436}.
CC -!- SIMILARITY: Belongs to the Hfq family. {ECO:0000255|HAMAP-
CC Rule:MF_00436}.
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DR EMBL; CP000884; ABX37643.1; -; Genomic_DNA.
DR RefSeq; WP_012206813.1; NC_010002.1.
DR AlphaFoldDB; A9BMU8; -.
DR SMR; A9BMU8; -.
DR STRING; 398578.Daci_5014; -.
DR PRIDE; A9BMU8; -.
DR EnsemblBacteria; ABX37643; ABX37643; Daci_5014.
DR GeneID; 60689362; -.
DR KEGG; dac:Daci_5014; -.
DR eggNOG; COG1923; Bacteria.
DR HOGENOM; CLU_113688_2_2_4; -.
DR OMA; QQMVYKH; -.
DR Proteomes; UP000000784; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd01716; Hfq; 1.
DR HAMAP; MF_00436; Hfq; 1.
DR InterPro; IPR005001; Hfq.
DR InterPro; IPR010920; LSM_dom_sf.
DR PANTHER; PTHR34772; PTHR34772; 1.
DR Pfam; PF17209; Hfq; 1.
DR SUPFAM; SSF50182; SSF50182; 1.
DR TIGRFAMs; TIGR02383; Hfq; 1.
PE 3: Inferred from homology;
KW Reference proteome; RNA-binding; Stress response.
FT CHAIN 1..83
FT /note="RNA-binding protein Hfq"
FT /id="PRO_1000190320"
SQ SEQUENCE 83 AA; 9089 MW; 3900EA4E203AA23E CRC64;
MSNKGQLLQD PFLNALRREH VPVSIYLVNG IKLQGQIESF DQYVVLLRNT VTQMVYKHAI
STIVPGRAVN FSTAEAAGSD ASA