HGD_PSEPU
ID HGD_PSEPU Reviewed; 433 AA.
AC Q6EMI9;
DT 14-MAY-2014, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=Homogentisate 1,2-dioxygenase {ECO:0000255|HAMAP-Rule:MF_00334};
DE Short=HGDO {ECO:0000255|HAMAP-Rule:MF_00334};
DE EC=1.13.11.5 {ECO:0000255|HAMAP-Rule:MF_00334};
DE AltName: Full=Homogentisate oxygenase {ECO:0000255|HAMAP-Rule:MF_00334};
DE AltName: Full=Homogentisic acid oxidase {ECO:0000255|HAMAP-Rule:MF_00334};
DE AltName: Full=Homogentisicase {ECO:0000255|HAMAP-Rule:MF_00334};
GN Name=hmgA {ECO:0000255|HAMAP-Rule:MF_00334};
OS Pseudomonas putida (Arthrobacter siderocapsulatus).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=303;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, DISRUPTION PHENOTYPE, AND
RP INDUCTION.
RC STRAIN=U;
RX PubMed=15262943; DOI=10.1128/jb.186.15.5062-5077.2004;
RA Arias-Barrau E., Olivera E.R., Luengo J.M., Fernandez C., Galan B.,
RA Garcia J.L., Diaz E., Minambres B.;
RT "The homogentisate pathway: a central catabolic pathway involved in the
RT degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in
RT Pseudomonas putida.";
RL J. Bacteriol. 186:5062-5077(2004).
CC -!- FUNCTION: Involved in the catabolism of homogentisate (2,5-
CC dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the
CC degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring
CC cleavage of the aromatic ring of 2,5-dihydroxyphenylacetate to yield
CC maleylacetoacetate. {ECO:0000269|PubMed:15262943}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=homogentisate + O2 = 4-maleylacetoacetate + H(+);
CC Xref=Rhea:RHEA:15449, ChEBI:CHEBI:15378, ChEBI:CHEBI:15379,
CC ChEBI:CHEBI:16169, ChEBI:CHEBI:17105; EC=1.13.11.5;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00334};
CC -!- COFACTOR:
CC Name=Fe cation; Xref=ChEBI:CHEBI:24875;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00334};
CC -!- PATHWAY: Amino-acid degradation; L-phenylalanine degradation;
CC acetoacetate and fumarate from L-phenylalanine: step 4/6.
CC {ECO:0000255|HAMAP-Rule:MF_00334}.
CC -!- SUBUNIT: Hexamer; dimer of trimers. {ECO:0000255|HAMAP-Rule:MF_00334}.
CC -!- INDUCTION: Induced by homogentisate and repressed by HmgR.
CC {ECO:0000269|PubMed:15262943}.
CC -!- DISRUPTION PHENOTYPE: Cells lacking this gene are unable to grow in
CC medium containing phenylalanine or tyrosine as the sole carbon sources,
CC and accumulate homogentisate. {ECO:0000269|PubMed:15262943}.
CC -!- SIMILARITY: Belongs to the homogentisate dioxygenase family.
CC {ECO:0000255|HAMAP-Rule:MF_00334}.
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DR EMBL; AY168855; AAO12527.1; -; Genomic_DNA.
DR RefSeq; WP_049275436.1; NZ_QLLF01000019.1.
DR AlphaFoldDB; Q6EMI9; -.
DR SMR; Q6EMI9; -.
DR STRING; 1240350.AMZE01000018_gene1082; -.
DR eggNOG; COG3508; Bacteria.
DR UniPathway; UPA00139; UER00339.
DR GO; GO:0004411; F:homogentisate 1,2-dioxygenase activity; IMP:UniProtKB.
DR GO; GO:0005506; F:iron ion binding; ISS:UniProtKB.
DR GO; GO:0006559; P:L-phenylalanine catabolic process; IMP:UniProtKB.
DR GO; GO:0006572; P:tyrosine catabolic process; IMP:UniProtKB.
DR Gene3D; 2.60.120.10; -; 1.
DR HAMAP; MF_00334; Homogentis_dioxygen; 1.
DR InterPro; IPR005708; Homogentis_dOase.
DR InterPro; IPR022950; Homogentis_dOase_bac.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR11056; PTHR11056; 1.
DR Pfam; PF04209; HgmA; 1.
DR SUPFAM; SSF51182; SSF51182; 1.
DR TIGRFAMs; TIGR01015; hmgA; 1.
PE 2: Evidence at transcript level;
KW Dioxygenase; Iron; Metal-binding; Oxidoreductase; Phenylalanine catabolism;
KW Tyrosine catabolism.
FT CHAIN 1..433
FT /note="Homogentisate 1,2-dioxygenase"
FT /id="PRO_0000428934"
FT ACT_SITE 288
FT /note="Proton acceptor"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00334"
FT BINDING 331
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00334"
FT BINDING 337
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00334"
FT BINDING 346
FT /ligand="homogentisate"
FT /ligand_id="ChEBI:CHEBI:16169"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00334"
FT BINDING 367
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00334"
FT BINDING 367
FT /ligand="homogentisate"
FT /ligand_id="ChEBI:CHEBI:16169"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00334"
SQ SEQUENCE 433 AA; 48024 MW; F0C7F7D7CC197299 CRC64;
MTRDTSPDLH YLSGFGNEFA SEALPGALPV GQNSPQRAPY GLYAELLSGT AFTMARSELR
RTWLYRIRPS ALHPRFERLA RQPLTAPLGA INPNRLRWSP QPIPAEPTDF IEGWLPMVAN
APAQKPAGVS IYIYCANRSM ERVFFNADGE LLLVPEQGRL RIATELGVME VGPLEIAVIP
RGMKFRVELL DGQARGYIAE NHGAPLRIPE LGPIGSNGLA NPRDFLTPVA HYEEAEGPVQ
LVQKFLGEHW ACELQHSPLD VVAWHGSNVP YKYDLRRFNT IGTVSFDHPD PSIFTVLTSP
TSVHGLANMD FVIFPPRWMV AENTFRPPWF HRNLMNEFMG LISGAYDAKA EGFLPGGASL
HGVMSAHGPD AETCEKAIAA DLAPHKIDNT MAFMFETSQV LRPSQQALEC PQLQADYDSC
WATLPSTFNP NRR