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HIRA_HUMAN
ID   HIRA_HUMAN              Reviewed;        1017 AA.
AC   P54198; Q05BU9; Q8IXN2;
DT   01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT   21-FEB-2006, sequence version 2.
DT   03-AUG-2022, entry version 204.
DE   RecName: Full=Protein HIRA;
DE   AltName: Full=TUP1-like enhancer of split protein 1;
GN   Name=HIRA; Synonyms=DGCR1, HIR, TUPLE1;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM LONG).
RC   TISSUE=Brain;
RX   PubMed=7633437; DOI=10.1093/hmg/4.5.791;
RA   Lamour V., Lecluse Y., Desmaze C., Spector M., Bodescot M., Aurias A.,
RA   Osley M.A., Lipinski M.;
RT   "A human homolog of the S. cerevisiae HIR1 and HIR2 transcriptional
RT   repressors cloned from the DiGeorge syndrome critical region.";
RL   Hum. Mol. Genet. 4:791-799(1995).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM LONG).
RX   PubMed=8681138; DOI=10.1101/gr.6.1.43;
RA   Lorain S., Demczuk S., Lamour V., Toth S., Aurias A., Roe B.A.,
RA   Lipinski M.;
RT   "Structural organization of the WD repeat protein-encoding gene HIRA in the
RT   DiGeorge syndrome critical region of human chromosome 22.";
RL   Genome Res. 6:43-50(1996).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM LONG).
RX   PubMed=15461802; DOI=10.1186/gb-2004-5-10-r84;
RA   Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A.,
RA   Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y., Huckle E.J.,
RA   Beare D.M., Dunham I.;
RT   "A genome annotation-driven approach to cloning the human ORFeome.";
RL   Genome Biol. 5:R84.1-R84.11(2004).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM LONG).
RC   TISSUE=Eye, and Lymph;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 45-1017 (ISOFORM SHORT).
RC   TISSUE=Fetal brain;
RX   PubMed=8111380; DOI=10.1093/hmg/2.12.2099;
RA   Halford S., Wadey R., Roberts C., Daw S.C.M., Whiting J.A., O'Donnell H.,
RA   Dunham I., Bentley D., Lindsay E., Baldini A., Francis F., Lehrach H.,
RA   Williamson R., Wilson D.I., Goodship J., Cross I., Burn J., Scambler P.J.;
RT   "Isolation of a putative transcriptional regulator from the region of 22q11
RT   deleted in DiGeorge syndrome, Shprintzen syndrome and familial congenital
RT   heart disease.";
RL   Hum. Mol. Genet. 2:2099-2107(1993).
RN   [6]
RP   TISSUE SPECIFICITY.
RX   PubMed=9063745; DOI=10.1093/hmg/6.2.247;
RA   Wilming L.G., Snoeren C.A.S., van Rijswijk A., Grosveld F., Meijers C.;
RT   "The murine homologue of HIRA, a DiGeorge syndrome candidate gene, is
RT   expressed in embryonic structures affected in human CATCH22 patients.";
RL   Hum. Mol. Genet. 6:247-258(1997).
RN   [7]
RP   INTERACTION WITH HIRIP3; HISTONE H2B; HISTONE H4 AND NFU1, AND SUBCELLULAR
RP   LOCATION.
RX   PubMed=9710638; DOI=10.1128/mcb.18.9.5546;
RA   Lorain S., Quivy J.-P., Monier-Gavelle F., Scamps C., Lecluse Y.,
RA   Almouzni G., Lipinski M.;
RT   "Core histones and HIRIP3, a novel histone-binding protein, directly
RT   interact with WD repeat protein HIRA.";
RL   Mol. Cell. Biol. 18:5546-5556(1998).
RN   [8]
RP   INTERACTION WITH CCNA1, SUBCELLULAR LOCATION, PHOSPHORYLATION AT THR-555
RP   AND SER-687, AND MUTAGENESIS OF THR-555 AND 628-LYS--LEU-631.
RX   PubMed=11238922; DOI=10.1128/mcb.21.5.1854-1865.2001;
RA   Hall C., Nelson D.M., Ye X., Baker K., DeCaprio J.A., Seeholzer S.,
RA   Lipinski M., Adams P.D.;
RT   "HIRA, the human homologue of yeast Hir1p and Hir2p, is a novel cyclin-cdk2
RT   substrate whose expression blocks S-phase progression.";
RL   Mol. Cell. Biol. 21:1854-1865(2001).
RN   [9]
RP   FUNCTION, AND SUBCELLULAR LOCATION.
RX   PubMed=12370293; DOI=10.1128/mcb.22.21.7459-7472.2002;
RA   Nelson D.M., Ye X., Hall C., Santos H., Ma T., Kao G.D., Yen T.J.,
RA   Harper J.W., Adams P.D.;
RT   "Coupling of DNA synthesis and histone synthesis in S phase independent of
RT   cyclin/cdk2 activity.";
RL   Mol. Cell. Biol. 22:7459-7472(2002).
RN   [10]
RP   INTERACTION WITH ASF1A.
RX   PubMed=14680630; DOI=10.1016/j.cub.2003.11.027;
RA   Daganzo S.M., Erzberger J.P., Lam W.M., Skordalakes E., Zhang R.,
RA   Franco A.A., Brill S.J., Adams P.D., Berger J.M., Kaufman P.D.;
RT   "Structure and function of the conserved core of histone deposition protein
RT   Asf1.";
RL   Curr. Biol. 13:2148-2158(2003).
RN   [11]
RP   FUNCTION, IDENTIFICATION BY MASS SPECTROMETRY, AND IDENTIFICATION IN A
RP   COMPLEX WITH ASF1A; CABIN1; HISTONE H3.3 AND UBN1.
RX   PubMed=14718166; DOI=10.1016/s0092-8674(03)01064-x;
RA   Tagami H., Ray-Gallet D., Almouzni G., Nakatani Y.;
RT   "Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways
RT   dependent or independent of DNA synthesis.";
RL   Cell 116:51-61(2004).
RN   [12]
RP   FUNCTION, INTERACTION WITH ASF1A, AND SUBCELLULAR LOCATION.
RX   PubMed=15621527; DOI=10.1016/j.devcel.2004.10.019;
RA   Zhang R., Poustovoitov M.V., Ye X., Santos H.A., Chen W., Daganzo S.M.,
RA   Erzberger J.P., Serebriiskii I.G., Canutescu A.A., Dunbrack R.L.,
RA   Pehrson J.R., Berger J.M., Kaufman P.D., Adams P.D.;
RT   "Formation of MacroH2A-containing senescence-associated heterochromatin
RT   foci and senescence driven by ASF1a and HIRA.";
RL   Dev. Cell 8:19-30(2005).
RN   [13]
RP   SUMOYLATION.
RX   PubMed=15561718; DOI=10.1074/jbc.m411718200;
RA   Gocke C.B., Yu H., Kang J.;
RT   "Systematic identification and analysis of mammalian small ubiquitin-like
RT   modifier substrates.";
RL   J. Biol. Chem. 280:5004-5012(2005).
RN   [14]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-584 AND THR-586, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=18669648; DOI=10.1073/pnas.0805139105;
RA   Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,
RA   Elledge S.J., Gygi S.P.;
RT   "A quantitative atlas of mitotic phosphorylation.";
RL   Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
RN   [15]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=19413330; DOI=10.1021/ac9004309;
RA   Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.;
RT   "Lys-N and trypsin cover complementary parts of the phosphoproteome in a
RT   refined SCX-based approach.";
RL   Anal. Chem. 81:4493-4501(2009).
RN   [16]
RP   INTERACTION WITH UBN1.
RX   PubMed=19029251; DOI=10.1128/mcb.01047-08;
RA   Banumathy G., Somaiah N., Zhang R., Tang Y., Hoffmann J., Andrake M.,
RA   Ceulemans H., Schultz D., Marmorstein R., Adams P.D.;
RT   "Human UBN1 is an ortholog of yeast Hpc2p and has an essential role in the
RT   HIRA/ASF1a chromatin-remodeling pathway in senescent cells.";
RL   Mol. Cell. Biol. 29:758-770(2009).
RN   [17]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-549; SER-557; THR-576 AND
RP   THR-586, AND IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Leukemic T-cell;
RX   PubMed=19690332; DOI=10.1126/scisignal.2000007;
RA   Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K.,
RA   Rodionov V., Han D.K.;
RT   "Quantitative phosphoproteomic analysis of T cell receptor signaling
RT   reveals system-wide modulation of protein-protein interactions.";
RL   Sci. Signal. 2:RA46-RA46(2009).
RN   [18]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-586 AND SER-661, AND
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma;
RX   PubMed=20068231; DOI=10.1126/scisignal.2000475;
RA   Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L.,
RA   Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.;
RT   "Quantitative phosphoproteomics reveals widespread full phosphorylation
RT   site occupancy during mitosis.";
RL   Sci. Signal. 3:RA3-RA3(2010).
RN   [19]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-610; SER-611; SER-612;
RP   SER-614 AND SER-661, AND IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE
RP   ANALYSIS].
RX   PubMed=21406692; DOI=10.1126/scisignal.2001570;
RA   Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T.,
RA   Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.;
RT   "System-wide temporal characterization of the proteome and phosphoproteome
RT   of human embryonic stem cell differentiation.";
RL   Sci. Signal. 4:RS3-RS3(2011).
RN   [20]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-111; SER-549; SER-584;
RP   THR-586; SER-612; SER-661 AND SER-675, AND IDENTIFICATION BY MASS
RP   SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Cervix carcinoma, and Erythroleukemia;
RX   PubMed=23186163; DOI=10.1021/pr300630k;
RA   Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
RA   Mohammed S.;
RT   "Toward a comprehensive characterization of a human cancer cell
RT   phosphoproteome.";
RL   J. Proteome Res. 12:260-271(2013).
RN   [21]
RP   INTERACTION WITH H3.Y.
RX   PubMed=28334823; DOI=10.1093/nar/gkx131;
RA   Zink L.M., Delbarre E., Eberl H.C., Keilhauer E.C., Boenisch C.,
RA   Puenzeler S., Bartkuhn M., Collas P., Mann M., Hake S.B.;
RT   "H3.Y discriminates between HIRA and DAXX chaperone complexes and reveals
RT   unexpected insights into human DAXX-H3.3-H4 binding and deposition
RT   requirements.";
RL   Nucleic Acids Res. 45:5691-5706(2017).
RN   [22]
RP   X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS) OF 425-472 IN COMPLEX WITH ASF1A, AND
RP   MUTAGENESIS OF 449-GLN--ARG-458; 459-ARG--GLN-468; ARG-459; ARG-460;
RP   ILE-461; LEU-464 AND ILE-466.
RX   PubMed=16980972; DOI=10.1038/nsmb1147;
RA   Tang Y., Poustovoitov M.V., Zhao K., Garfinkel M., Canutescu A.,
RA   Dunbrack R., Adams P.D., Marmorstein R.;
RT   "Structure of a human ASF1a-HIRA complex and insights into specificity of
RT   histone chaperone complex assembly.";
RL   Nat. Struct. Mol. Biol. 13:921-929(2006).
CC   -!- FUNCTION: Cooperates with ASF1A to promote replication-independent
CC       chromatin assembly. Required for the periodic repression of histone
CC       gene transcription during the cell cycle. Required for the formation of
CC       senescence-associated heterochromatin foci (SAHF) and efficient
CC       senescence-associated cell cycle exit. {ECO:0000269|PubMed:12370293,
CC       ECO:0000269|PubMed:14718166, ECO:0000269|PubMed:15621527}.
CC   -!- SUBUNIT: Interacts with histone H3-3B, PAX3 and PAX7 (By similarity).
CC       Interacts with histone H3.Y (PubMed:28334823). Interacts with CCNA1,
CC       HIRIP3, NFU1/HIRIP5 and histone H2B. Part of a complex which includes
CC       ASF1A, CABIN1, histone H3.3, histone H4 and UBN1 (PubMed:11238922,
CC       PubMed:14680630, PubMed:14718166, PubMed:15621527, PubMed:16980972,
CC       PubMed:19029251, PubMed:9710638). {ECO:0000250|UniProtKB:Q61666,
CC       ECO:0000269|PubMed:11238922, ECO:0000269|PubMed:14680630,
CC       ECO:0000269|PubMed:14718166, ECO:0000269|PubMed:15621527,
CC       ECO:0000269|PubMed:16980972, ECO:0000269|PubMed:19029251,
CC       ECO:0000269|PubMed:28334823, ECO:0000269|PubMed:9710638}.
CC   -!- INTERACTION:
CC       P54198; Q9Y294: ASF1A; NbExp=14; IntAct=EBI-372342, EBI-749553;
CC       P54198; Q9NVP2: ASF1B; NbExp=4; IntAct=EBI-372342, EBI-1055650;
CC       P54198; Q9NPG3: UBN1; NbExp=10; IntAct=EBI-372342, EBI-2880187;
CC   -!- SUBCELLULAR LOCATION: Nucleus. Nucleus, PML body. Note=Primarily,
CC       though not exclusively, localized to the nucleus. Localizes to PML
CC       bodies immediately prior to onset of senescence.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=Long;
CC         IsoId=P54198-1; Sequence=Displayed;
CC       Name=Short;
CC         IsoId=P54198-2; Sequence=VSP_006772;
CC   -!- TISSUE SPECIFICITY: Expressed at high levels in kidney, pancreas and
CC       skeletal muscle and at lower levels in brain, heart, liver, lung, and
CC       placenta. {ECO:0000269|PubMed:9063745}.
CC   -!- DEVELOPMENTAL STAGE: Expressed during embryogenesis.
CC   -!- PTM: Sumoylated. {ECO:0000269|PubMed:15561718}.
CC   -!- PTM: Phosphorylated by CDK2/CCNA1 and CDK2/CCNE1 on Thr-555 in vitro.
CC       Also phosphorylated on Thr-555 and Ser-687 in vivo.
CC       {ECO:0000269|PubMed:11238922}.
CC   -!- SIMILARITY: Belongs to the WD repeat HIR1 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=CAA53044.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=CAA54721.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=CAA57436.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; X81844; CAA57436.1; ALT_INIT; mRNA.
DR   EMBL; X77633; CAA54721.1; ALT_INIT; mRNA.
DR   EMBL; X89887; CAA61979.1; -; mRNA.
DR   EMBL; X91501; CAA62800.1; -; Genomic_DNA.
DR   EMBL; CR456503; CAG30389.1; -; mRNA.
DR   EMBL; BC032721; AAH32721.1; -; mRNA.
DR   EMBL; BC039835; AAH39835.1; -; mRNA.
DR   EMBL; X75296; CAA53044.1; ALT_INIT; mRNA.
DR   CCDS; CCDS13759.1; -. [P54198-1]
DR   PIR; I37465; I37465.
DR   PIR; S45344; S45344.
DR   RefSeq; NP_003316.3; NM_003325.3. [P54198-1]
DR   PDB; 2I32; X-ray; 2.70 A; E/F=425-472.
DR   PDB; 5YJE; X-ray; 2.45 A; A/B/C=644-1017.
DR   PDBsum; 2I32; -.
DR   PDBsum; 5YJE; -.
DR   AlphaFoldDB; P54198; -.
DR   SMR; P54198; -.
DR   BioGRID; 113141; 137.
DR   CORUM; P54198; -.
DR   DIP; DIP-29240N; -.
DR   ELM; P54198; -.
DR   IntAct; P54198; 40.
DR   MINT; P54198; -.
DR   STRING; 9606.ENSP00000263208; -.
DR   GlyGen; P54198; 4 sites, 1 O-linked glycan (4 sites).
DR   iPTMnet; P54198; -.
DR   PhosphoSitePlus; P54198; -.
DR   BioMuta; HIRA; -.
DR   DMDM; 88984228; -.
DR   EPD; P54198; -.
DR   jPOST; P54198; -.
DR   MassIVE; P54198; -.
DR   MaxQB; P54198; -.
DR   PaxDb; P54198; -.
DR   PeptideAtlas; P54198; -.
DR   PRIDE; P54198; -.
DR   ProteomicsDB; 56652; -. [P54198-1]
DR   ProteomicsDB; 56653; -. [P54198-2]
DR   Antibodypedia; 34961; 278 antibodies from 30 providers.
DR   DNASU; 7290; -.
DR   Ensembl; ENST00000263208.5; ENSP00000263208.5; ENSG00000100084.14. [P54198-1]
DR   Ensembl; ENST00000340170.8; ENSP00000345350.4; ENSG00000100084.14. [P54198-2]
DR   GeneID; 7290; -.
DR   KEGG; hsa:7290; -.
DR   MANE-Select; ENST00000263208.5; ENSP00000263208.5; NM_003325.4; NP_003316.3.
DR   UCSC; uc002zpf.2; human. [P54198-1]
DR   CTD; 7290; -.
DR   DisGeNET; 7290; -.
DR   GeneCards; HIRA; -.
DR   HGNC; HGNC:4916; HIRA.
DR   HPA; ENSG00000100084; Tissue enhanced (thyroid).
DR   MalaCards; HIRA; -.
DR   MIM; 600237; gene.
DR   neXtProt; NX_P54198; -.
DR   OpenTargets; ENSG00000100084; -.
DR   Orphanet; 567; 22q11.2 deletion syndrome.
DR   PharmGKB; PA29293; -.
DR   VEuPathDB; HostDB:ENSG00000100084; -.
DR   eggNOG; KOG0973; Eukaryota.
DR   GeneTree; ENSGT00550000074919; -.
DR   HOGENOM; CLU_004372_0_0_1; -.
DR   InParanoid; P54198; -.
DR   OMA; RGSWDGD; -.
DR   OrthoDB; 685536at2759; -.
DR   PhylomeDB; P54198; -.
DR   TreeFam; TF323161; -.
DR   PathwayCommons; P54198; -.
DR   Reactome; R-HSA-2559584; Formation of Senescence-Associated Heterochromatin Foci (SAHF).
DR   SignaLink; P54198; -.
DR   SIGNOR; P54198; -.
DR   BioGRID-ORCS; 7290; 468 hits in 1092 CRISPR screens.
DR   ChiTaRS; HIRA; human.
DR   EvolutionaryTrace; P54198; -.
DR   GeneWiki; HIRA; -.
DR   GenomeRNAi; 7290; -.
DR   Pharos; P54198; Tbio.
DR   PRO; PR:P54198; -.
DR   Proteomes; UP000005640; Chromosome 22.
DR   RNAct; P54198; protein.
DR   Bgee; ENSG00000100084; Expressed in left lobe of thyroid gland and 166 other tissues.
DR   ExpressionAtlas; P54198; baseline and differential.
DR   Genevisible; P54198; HS.
DR   GO; GO:0000785; C:chromatin; IDA:UniProtKB.
DR   GO; GO:0070062; C:extracellular exosome; HDA:UniProtKB.
DR   GO; GO:0000417; C:HIR complex; IBA:GO_Central.
DR   GO; GO:0005654; C:nucleoplasm; IDA:HPA.
DR   GO; GO:0005634; C:nucleus; TAS:ProtInc.
DR   GO; GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
DR   GO; GO:0032991; C:protein-containing complex; IDA:UniProtKB.
DR   GO; GO:0042393; F:histone binding; IDA:ARUK-UCL.
DR   GO; GO:0061629; F:RNA polymerase II-specific DNA-binding transcription factor binding; IPI:ARUK-UCL.
DR   GO; GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
DR   GO; GO:0009653; P:anatomical structure morphogenesis; TAS:ProtInc.
DR   GO; GO:0006336; P:DNA replication-independent chromatin assembly; IDA:UniProtKB.
DR   GO; GO:0007369; P:gastrulation; IEA:Ensembl.
DR   GO; GO:0042692; P:muscle cell differentiation; IEA:Ensembl.
DR   GO; GO:0001649; P:osteoblast differentiation; IEA:Ensembl.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; TAS:ProtInc.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR   Gene3D; 2.130.10.10; -; 2.
DR   IDEAL; IID00154; -.
DR   InterPro; IPR031120; HIR1.
DR   InterPro; IPR011494; Hira.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR001680; WD40_repeat.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   PANTHER; PTHR13831; PTHR13831; 1.
DR   Pfam; PF07569; Hira; 1.
DR   Pfam; PF00400; WD40; 4.
DR   SMART; SM00320; WD40; 7.
DR   SUPFAM; SSF50978; SSF50978; 1.
DR   PROSITE; PS00678; WD_REPEATS_1; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 3.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Alternative splicing; Chromatin regulator; Nucleus;
KW   Phosphoprotein; Reference proteome; Repeat; Repressor; Transcription;
KW   Transcription regulation; Ubl conjugation; WD repeat.
FT   CHAIN           1..1017
FT                   /note="Protein HIRA"
FT                   /id="PRO_0000051019"
FT   REPEAT          11..53
FT                   /note="WD 1"
FT   REPEAT          68..107
FT                   /note="WD 2"
FT   REPEAT          129..168
FT                   /note="WD 3"
FT   REPEAT          172..211
FT                   /note="WD 4"
FT   REPEAT          220..263
FT                   /note="WD 5"
FT   REPEAT          266..322
FT                   /note="WD 6"
FT   REPEAT          326..367
FT                   /note="WD 7"
FT   REGION          421..729
FT                   /note="Interaction with CCNA1"
FT                   /evidence="ECO:0000269|PubMed:11238922"
FT   REGION          421..479
FT                   /note="Interaction with ASF1A"
FT   REGION          439..475
FT                   /note="Required for repression of histone gene
FT                   transcription"
FT   REGION          494..555
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          570..589
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          593..826
FT                   /note="Interaction with histone H2B"
FT   REGION          594..739
FT                   /note="Interaction with PAX3"
FT                   /evidence="ECO:0000250"
FT   REGION          604..625
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          738..1017
FT                   /note="Interaction with histone H4"
FT   REGION          740..828
FT                   /note="Interaction with PAX3"
FT                   /evidence="ECO:0000250"
FT   COMPBIAS        494..515
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        533..555
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         111
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         549
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19690332,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         555
FT                   /note="Phosphothreonine; by CDK2"
FT                   /evidence="ECO:0000269|PubMed:11238922"
FT   MOD_RES         557
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:19690332"
FT   MOD_RES         576
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:19690332"
FT   MOD_RES         584
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         586
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0007744|PubMed:18669648,
FT                   ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         610
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21406692"
FT   MOD_RES         611
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21406692"
FT   MOD_RES         612
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21406692,
FT                   ECO:0007744|PubMed:23186163"
FT   MOD_RES         614
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21406692"
FT   MOD_RES         661
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:20068231,
FT                   ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163"
FT   MOD_RES         675
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   MOD_RES         687
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:11238922"
FT   VAR_SEQ         593..799
FT                   /note="Missing (in isoform Short)"
FT                   /evidence="ECO:0000303|PubMed:8111380"
FT                   /id="VSP_006772"
FT   MUTAGEN         449..458
FT                   /note="Missing: Impairs binding to ASF1A."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         458..460
FT                   /note="RRR->AKK: Abrogates binding to ASF1A."
FT   MUTAGEN         458..460
FT                   /note="RRR->KKK: Impairs binding to ASF1A."
FT   MUTAGEN         458..459
FT                   /note="RR->AK: Impairs binding to ASF1A."
FT   MUTAGEN         458
FT                   /note="R->A: Impairs binding to ASF1A."
FT   MUTAGEN         458
FT                   /note="R->K: Impairs binding to ASF1A; when associated with
FT                   K-460."
FT   MUTAGEN         459..468
FT                   /note="Missing: Abrogates binding to ASF1A."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         459
FT                   /note="R->A: Abrogates binding to ASF1A."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         460
FT                   /note="R->A: Abrogates binding to ASF1A."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         460
FT                   /note="R->K: Impairs binding to ASF1A; when associated with
FT                   K-458."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         461
FT                   /note="I->D: Abrogates binding to ASF1A."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         464
FT                   /note="L->D: Impairs binding to ASF1A."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         466
FT                   /note="I->D: Impairs binding to ASF1A."
FT                   /evidence="ECO:0000269|PubMed:16980972"
FT   MUTAGEN         555
FT                   /note="T->A: Impairs phosphorylation by CDK2."
FT                   /evidence="ECO:0000269|PubMed:11238922"
FT   MUTAGEN         628..631
FT                   /note="KRKL->AAAA: Impairs binding to CCNA1 and
FT                   phosphorylation by CDK2."
FT                   /evidence="ECO:0000269|PubMed:11238922"
FT   CONFLICT        9
FT                   /note="V -> G (in Ref. 1; CAA54721)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        889
FT                   /note="I -> N (in Ref. 1; CAA54721/CAA57436 and 2;
FT                   CAA61979)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        990
FT                   /note="L -> M (in Ref. 5; CAA53044)"
FT                   /evidence="ECO:0000305"
FT   STRAND          450..453
FT                   /evidence="ECO:0007829|PDB:2I32"
FT   STRAND          459..462
FT                   /evidence="ECO:0007829|PDB:2I32"
FT   STRAND          690..695
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          702..713
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          716..725
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          728..736
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          738..743
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          745..752
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   TURN            753..755
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          756..761
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          766..772
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          777..783
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          786..791
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          794..800
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   TURN            801..804
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          805..813
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           814..817
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          824..829
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          835..839
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          842..848
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   TURN            849..852
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          853..859
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           860..862
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   TURN            865..867
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           885..890
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          904..906
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           908..928
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           932..949
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           952..963
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   STRAND          976..978
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           983..995
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           998..1000
FT                   /evidence="ECO:0007829|PDB:5YJE"
FT   HELIX           1001..1015
FT                   /evidence="ECO:0007829|PDB:5YJE"
SQ   SEQUENCE   1017 AA;  111835 MW;  475784B2FF9D16D6 CRC64;
     MKLLKPTWVN HNGKPIFSVD IHPDGTKFAT GGQGQDSGKV VIWNMSPVLQ EDDEKDENIP
     KMLCQMDNHL ACVNCVRWSN SGMYLASGGD DKLIMVWKRA TYIGPSTVFG SSGKLANVEQ
     WRCVSILRNH SGDVMDVAWS PHDAWLASCS VDNTVVIWNA VKFPEILATL RGHSGLVKGL
     TWDPVGKYIA SQADDRSLKV WRTLDWQLET SITKPFDECG GTTHVLRLSW SPDGHYLVSA
     HAMNNSGPTA QIIEREGWKT NMDFVGHRKA VTVVKFNPKI FKKKQKNGSS AKPSCPYCCC
     AVGSKDRSLS VWLTCLKRPL VVIHELFDKS IMDISWTLNG LGILVCSMDG SVAFLDFSQD
     ELGDPLSEEE KSRIHQSTYG KSLAIMTEAQ LSTAVIENPE MLKYQRRQQQ QQLDQKSAAT
     REMGSATSVA GVVNGESLED IRKNLLKKQV ETRTADGRRR ITPLCIAQLD TGDFSTAFFN
     SIPLSGSLAG TMLSSHSSPQ LLPLDSSTPN SFGASKPCTE PVVAASARPA GDSVNKDSMN
     ATSTPAALSP SVLTTPSKIE PMKAFDSRFT ERSKATPGAP ALTSMTPTAV ERLKEQNLVK
     ELRPRDLLES SSDSDEKVPL AKASSLSKRK LELEVETVEK KKKGRPRKDS RLMPVSLSVQ
     SPAALTAEKE AMCLSAPALA LKLPIPSPQR AFTLQVSSDP SMYIEVENEV TVVGGVKLSR
     LKCNREGKEW ETVLTSRILT AAGSCDVVCV ACEKRMLSVF STCGRRLLSP ILLPSPISTL
     HCTGSYVMAL TAAATLSVWD VHRQVVVVKE ESLHSILAGS DMTVSQILLT QHGIPVMNLS
     DGKAYCFNPS LSTWNLVSDK QDSLAQCADF RSSLPSQDAM LCSGPLAIIQ GRTSNSGRQA
     ARLFSVPHVV QQETTLAYLE NQVAAALTLQ SSHEYRHWLL VYARYLVNEG FEYRLREICK
     DLLGPVHYST GSQWESTVVG LRKRELLKEL LPVIGQNLRF QRLFTECQEQ LDILRDK
 
 
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