HM20A_XENTR
ID HM20A_XENTR Reviewed; 345 AA.
AC Q6DIJ5;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=High mobility group protein 20A;
DE AltName: Full=HMG box-containing protein 20A;
GN Name=hmg20a;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Plays a role in neuronal differentiation.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00267}.
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DR EMBL; BC075543; AAH75543.1; -; mRNA.
DR RefSeq; NP_001006760.1; NM_001006759.1.
DR RefSeq; XP_012821857.1; XM_012966403.2.
DR RefSeq; XP_012821859.1; XM_012966405.2.
DR RefSeq; XP_012821860.1; XM_012966406.2.
DR RefSeq; XP_012821861.1; XM_012966407.2.
DR AlphaFoldDB; Q6DIJ5; -.
DR SMR; Q6DIJ5; -.
DR STRING; 8364.ENSXETP00000012795; -.
DR PaxDb; Q6DIJ5; -.
DR DNASU; 448440; -.
DR GeneID; 448440; -.
DR KEGG; xtr:448440; -.
DR CTD; 10363; -.
DR Xenbase; XB-GENE-955353; hmg20a.
DR eggNOG; KOG0381; Eukaryota.
DR HOGENOM; CLU_060006_0_0_1; -.
DR InParanoid; Q6DIJ5; -.
DR OMA; IFTHEFL; -.
DR OrthoDB; 1458939at2759; -.
DR PhylomeDB; Q6DIJ5; -.
DR TreeFam; TF106440; -.
DR Proteomes; UP000008143; Chromosome 3.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000015269; Expressed in testis and 13 other tissues.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR Gene3D; 1.10.30.10; -; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; SSF47095; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..345
FT /note="High mobility group protein 20A"
FT /id="PRO_0000238653"
FT DNA_BIND 101..169
FT /note="HMG box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00267"
FT REGION 1..124
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 167..198
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 227..290
FT /evidence="ECO:0000255"
FT COMPBIAS 29..70
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 167..183
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 345 AA; 39713 MW; 630A8F1B7E59C72A CRC64;
MENTASAAPP SSEDLVVDTK ENAEPPFCGI SLSGSSQAPF HPQSPTLQQD ERDELILQQS
GEQQLGNSGE LRQEEELPKT RRGGWTKGRK RKRSPRDNNA PKAPLTGYVR FMNERREQLR
TERPDVPFPE ITRIVGSEWS KLPAHEKQHY LDEAEKDKER YTKELQQYQN TDAYQTYSRK
AQSRQKGRQQ RQEGVRGVPI NTEKESILKE RPIFDIPIFT EEFLNHSKAR EAELRQLRKS
NMEFEERNAA LQKHVESMRS AVQRLEAELN QEQERNSLLQ QHLQSVRQAL THCLQSVPIP
GTTEIPTLET IDLYMSRLQN AVLTHPKESE VIISGVREVL SQLEG