HM23_CAEEL
ID HM23_CAEEL Reviewed; 305 AA.
AC P34663; Q9TYD8;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1994, sequence version 1.
DT 03-AUG-2022, entry version 144.
DE RecName: Full=Homeobox protein ceh-23;
GN Name=ceh-23; ORFNames=ZK652.5;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=7906398; DOI=10.1038/368032a0;
RA Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L., Gardner A.,
RA Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M.,
RA Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C.,
RA Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M.,
RA Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA Wilkinson-Sproat J., Wohldman P.;
RT "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT elegans.";
RL Nature 368:32-38(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 3-305.
RX PubMed=8101474; DOI=10.1016/0092-8674(93)90292-x;
RA Wang B.B., Mueller-Immergluck M.M., Austin J., Robinson N.T.,
RA Chisholm A.D., Kenyon C.;
RT "A homeotic gene cluster patterns the anteroposterior body axis of C.
RT elegans.";
RL Cell 74:29-42(1993).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the distal-less homeobox family. {ECO:0000305}.
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DR EMBL; FO080278; CCD62550.1; -; Genomic_DNA.
DR EMBL; L19249; AAC37167.1; -; mRNA.
DR PIR; S44907; S44907.
DR RefSeq; NP_498700.1; NM_066299.3.
DR AlphaFoldDB; P34663; -.
DR SMR; P34663; -.
DR BioGRID; 41304; 11.
DR IntAct; P34663; 11.
DR STRING; 6239.ZK652.5; -.
DR PaxDb; P34663; -.
DR EnsemblMetazoa; ZK652.5.1; ZK652.5.1; WBGene00000446.
DR GeneID; 176096; -.
DR KEGG; cel:CELE_ZK652.5; -.
DR UCSC; ZK652.5; c. elegans.
DR CTD; 176096; -.
DR WormBase; ZK652.5; CE00451; WBGene00000446; ceh-23.
DR eggNOG; KOG0843; Eukaryota.
DR HOGENOM; CLU_078608_0_0_1; -.
DR InParanoid; P34663; -.
DR OMA; YSETNME; -.
DR OrthoDB; 1594142at2759; -.
DR PhylomeDB; P34663; -.
DR SignaLink; P34663; -.
DR PRO; PR:P34663; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00000446; Expressed in larva.
DR GO; GO:0005634; C:nucleus; IDA:WormBase.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0008340; P:determination of adult lifespan; IGI:WormBase.
DR GO; GO:1904081; P:positive regulation of transcription from RNA polymerase II promoter involved in neuron differentiation; IMP:WormBase.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; DNA-binding; Homeobox; Nucleus; Reference proteome.
FT CHAIN 1..305
FT /note="Homeobox protein ceh-23"
FT /id="PRO_0000048993"
FT DNA_BIND 211..270
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 113..140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 262..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..139
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 266..284
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 285..305
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 305 AA; 33261 MW; C9A0CE8B6489362E CRC64;
MDTHLPFQTL PVSTPLPVSS SSLTDVLQTI AALQACPTSC IPSTSTGMLS PNLPFSATIP
RVNLFPPSQP ANSLILPTIP AQPFIPNPSL LQANPSAVEA LANALFATTS RRASCPEPPA
SSQATVTLQV PSTGSPERRR YSETNMEVLL REQLAQLMPP TSQLPGMPGC YYQHVPAAGT
SGIQGSLDAA LMGAVPLAMN SMAHSRRAAN HRKARTIYGT TQTQQLEDMF KGQMYVVGAE
RENLAQRLGL SPSQVRIWFQ NRRSKHRRKQ QEEQQSTTLE EKSEEIGKDE EEDDEEDEDD
VKVLN