HM30_CAEEL
ID HM30_CAEEL Reviewed; 237 AA.
AC Q22909;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 2.
DT 03-AUG-2022, entry version 142.
DE RecName: Full=Homeobox protein ceh-30;
GN Name=ceh-30; ORFNames=C33D12.7;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=18056428; DOI=10.1101/gad.1607007;
RA Schwartz H.T., Horvitz H.R.;
RT "The C. elegans protein CEH-30 protects male-specific neurons from
RT apoptosis independently of the Bcl-2 homolog CED-9.";
RL Genes Dev. 21:3181-3194(2007).
CC -!- FUNCTION: Cell-type specific anti-apoptotic transcription factor
CC required for the sexually dimorphic survival of the male-specific CEM
CC (cephalic male) sensory neurons during sex determination. In
CC hermaphrodites, the homologous cells undergo programmed cell death due
CC to transcriptional repression of ceh-30 by tra-1, the terminal
CC regulator in the sex determination pathway.
CC {ECO:0000269|PubMed:18056428}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108,
CC ECO:0000269|PubMed:18056428}.
CC -!- TISSUE SPECIFICITY: Expressed transiently in embryonic CEM (cephalic
CC male) sensory neurons. {ECO:0000269|PubMed:18056428}.
CC -!- DISRUPTION PHENOTYPE: Worms undergo programmed cell death of CEM
CC (cephalic male) sensory neurons in males.
CC {ECO:0000269|PubMed:18056428}.
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DR EMBL; FO080757; CCD66474.1; -; Genomic_DNA.
DR PIR; T25610; T25610.
DR RefSeq; NP_508524.2; NM_076123.3.
DR AlphaFoldDB; Q22909; -.
DR SMR; Q22909; -.
DR BioGRID; 56122; 12.
DR IntAct; Q22909; 11.
DR STRING; 6239.C33D12.7; -.
DR EPD; Q22909; -.
DR PaxDb; Q22909; -.
DR PRIDE; Q22909; -.
DR EnsemblMetazoa; C33D12.7.1; C33D12.7.1; WBGene00000451.
DR EnsemblMetazoa; C33D12.7.2; C33D12.7.2; WBGene00000451.
DR GeneID; 191620; -.
DR KEGG; cel:CELE_C33D12.7; -.
DR UCSC; C33D12.7; c. elegans.
DR CTD; 191620; -.
DR WormBase; C33D12.7; CE42074; WBGene00000451; ceh-30.
DR eggNOG; KOG0488; Eukaryota.
DR GeneTree; ENSGT00940000169370; -.
DR HOGENOM; CLU_102319_0_0_1; -.
DR InParanoid; Q22909; -.
DR OMA; SPYWANY; -.
DR OrthoDB; 1449832at2759; -.
DR PhylomeDB; Q22909; -.
DR SignaLink; Q22909; -.
DR PRO; PR:Q22909; -.
DR Proteomes; UP000001940; Chromosome X.
DR Bgee; WBGene00000451; Expressed in pharyngeal muscle cell (C elegans) and 3 other tissues.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.
DR GO; GO:0007399; P:nervous system development; IMP:UniProtKB.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0007548; P:sex differentiation; IMP:UniProtKB.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR020479; Homeobox_metazoa.
DR InterPro; IPR000047; HTH_motif.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00024; HOMEOBOX.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; DNA-binding; Homeobox; Nucleus;
KW Reference proteome; Sexual differentiation; Transcription;
KW Transcription regulation.
FT CHAIN 1..237
FT /note="Homeobox protein ceh-30"
FT /id="PRO_0000048996"
FT DNA_BIND 95..154
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 49..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 209..237
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 49..81
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 237 AA; 26131 MW; 52DFF67EE59ED398 CRC64;
MSLLDPRQFL LPAFYLDPTT QALLAQAAST SPCNKISSSS SFRISDILEQ SPNNSSHSND
HDPSPQSIKS DFSTSPRASS PGGDRMGSPG SCKKSRKART IFTDKQLQEL ENTFEKQKYL
SVQDRMDLAH RMGLTDTQVK TWYQNRRTKW KRQATSGMDL LSEPGNLSAV QNLIRSSPYW
ANYITALPMG TQLPMMGLPM SMIVPPAHAF QPSSSSNSPS THISSESPQL DVSSNSE