HMGB4_BOVIN
ID HMGB4_BOVIN Reviewed; 194 AA.
AC Q32L34;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2005, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=High mobility group protein B4;
GN Name=HMGB4;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Crossbred X Angus; TISSUE=Liver;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q6P8W9}.
CC Chromosome {ECO:0000250|UniProtKB:Q6P8W9}. Note=Interacts specifically
CC with the sex chromosomes. {ECO:0000250|UniProtKB:Q6P8W9}.
CC -!- SIMILARITY: Belongs to the HMGB family. {ECO:0000305}.
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DR EMBL; BC109790; AAI09791.1; -; mRNA.
DR RefSeq; NP_001035652.1; NM_001040562.3.
DR AlphaFoldDB; Q32L34; -.
DR SMR; Q32L34; -.
DR STRING; 9913.ENSBTAP00000000438; -.
DR PaxDb; Q32L34; -.
DR PRIDE; Q32L34; -.
DR Ensembl; ENSBTAT00000000438; ENSBTAP00000000438; ENSBTAG00000000335.
DR GeneID; 539195; -.
DR KEGG; bta:539195; -.
DR CTD; 127540; -.
DR VEuPathDB; HostDB:ENSBTAG00000000335; -.
DR VGNC; VGNC:29876; HMGB4.
DR eggNOG; KOG0381; Eukaryota.
DR GeneTree; ENSGT00940000162735; -.
DR HOGENOM; CLU_082854_0_4_1; -.
DR InParanoid; Q32L34; -.
DR OMA; KMWSAKT; -.
DR OrthoDB; 1641977at2759; -.
DR TreeFam; TF105371; -.
DR Proteomes; UP000009136; Chromosome 3.
DR Bgee; ENSBTAG00000000335; Expressed in semen and 15 other tissues.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008301; F:DNA binding, bending; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.30.10; -; 2.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR Pfam; PF00505; HMG_box; 1.
DR Pfam; PF09011; HMG_box_2; 1.
DR SMART; SM00398; HMG; 2.
DR SUPFAM; SSF47095; SSF47095; 2.
DR PROSITE; PS50118; HMG_BOX_2; 2.
PE 2: Evidence at transcript level;
KW Chromosome; DNA-binding; Nucleus; Reference proteome; Repeat.
FT CHAIN 1..194
FT /note="High mobility group protein B4"
FT /id="PRO_0000269179"
FT DNA_BIND 9..79
FT /note="HMG box 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00267"
FT DNA_BIND 93..161
FT /note="HMG box 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00267"
SQ SEQUENCE 194 AA; 23021 MW; 51A8DC1EA52A9FC1 CRC64;
MGKRDQLKPK ANVSSYIHFL LNYRNKFKEQ QPNTYLGFKE FSRKCSEKWR SISKHEKAKY
EALAKLDKAR YQEEMMNYFG RRKKRRKRDP HAPRRPPSSF LLFCQDHYAQ LKSENPSWSV
VQVAKASGKM WSAKTDVDKQ PYEQRAALLR AKYREELSVY RNQFNARKTC LQESATNQCR
EFEQAESDTT DGSN