HMGH_IIV6
ID HMGH_IIV6 Reviewed; 242 AA.
AC P40628; Q91FC4;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 14-DEC-2011, sequence version 2.
DT 07-OCT-2020, entry version 87.
DE RecName: Full=High mobility group protein homolog;
GN Name=EF1; OrderedLocusNames=401R;
OS Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes;
OC Pimascovirales; Iridoviridae; Betairidovirinae; Iridovirus.
OX NCBI_TaxID=176652;
OH NCBI_TaxID=6997; Acheta domesticus (House cricket).
OH NCBI_TaxID=168631; Chilo suppressalis (Asiatic rice borer moth).
OH NCBI_TaxID=6999; Gryllus bimaculatus (Two-spotted cricket).
OH NCBI_TaxID=58607; Gryllus campestris.
OH NCBI_TaxID=7108; Spodoptera frugiperda (Fall armyworm).
RN [1]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=8121799; DOI=10.1093/nar/22.2.158;
RA Schnitzler P., Hug M., Handermann M., Janssen W., Koonin E.V., Delius H.,
RA Darai C.;
RT "Identification of genes encoding zinc finger proteins, non-histone
RT chromosomal HMG protein homologue, and a putative GTP phosphohydrolase in
RT the genome of Chilo iridescent virus.";
RL Nucleic Acids Res. 22:158-166(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11448171; DOI=10.1006/viro.2001.0963;
RA Jakob N.J., Mueller K., Bahr U., Darai G.;
RT "Analysis of the first complete DNA sequence of an invertebrate iridovirus:
RT coding strategy of the genome of Chilo iridescent virus.";
RL Virology 286:182-196(2001).
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000305}.
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DR EMBL; L22300; AAA17843.1; -; Unassigned_DNA.
DR EMBL; AF303741; AAK82261.1; -; Genomic_DNA.
DR PIR; S71905; S71905.
DR RefSeq; NP_149864.1; NC_003038.1.
DR SMR; P40628; -.
DR GeneID; 1733017; -.
DR KEGG; vg:1733017; -.
DR Proteomes; UP000001359; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.30.10; -; 2.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 2.
DR SUPFAM; SSF47095; SSF47095; 2.
DR PROSITE; PS50118; HMG_BOX_2; 2.
PE 4: Predicted;
KW DNA-binding; Host nucleus; Reference proteome; Repeat.
FT CHAIN 1..242
FT /note="High mobility group protein homolog"
FT /id="PRO_0000048594"
FT DNA_BIND 54..122
FT /note="HMG box 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00267"
FT DNA_BIND 126..197
FT /note="HMG box 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00267"
FT CONFLICT 132
FT /note="G -> A (in Ref. 2; AAK82261)"
FT /evidence="ECO:0000305"
FT CONFLICT 142..143
FT /note="KI -> QGL (in Ref. 2; AAK82261)"
FT /evidence="ECO:0000305"
FT CONFLICT 215..242
FT /note="SICSSNVKAIQELIGTTKSSKKNKEIKV -> LVFVLAM (in Ref. 1;
FT AAA17843)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 242 AA; 28182 MW; EE2343DA27F92282 CRC64;
MKSKKELMDA LNKLVITEIC SIFPDIQRVW EDQEFQKKFA STIGVKPKDV TNVPKRNKSS
YLFFCQEIRP SIVAEMPDIK PNQVMVHLGK KWSELPLEDR KKYDVMAVED RKRYLASKEA
NKKLNKPVKI SGYLQFCADE RKIKLKFPDL TTKDITAKLG GMWNDYKKNN PQYLKSKYGY
EIVEQHYDYE KNEIDKENII PSSHRRKMVP SIPVSICSSN VKAIQELIGT TKSSKKNKEI
KV