HMGL_IPONI
ID HMGL_IPONI Reviewed; 144 AA.
AC P40619;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=HMG1/2-like protein;
OS Ipomoea nil (Japanese morning glory) (Pharbitis nil).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea.
OX NCBI_TaxID=35883;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Cotyledon;
RX PubMed=8251634; DOI=10.1007/bf00021536;
RA Zheng C.C., Bui A.Q., O'Neill S.D.;
RT "Abundance of an mRNA encoding a high mobility group DNA-binding protein is
RT regulated by light and an endogenous rhythm.";
RL Plant Mol. Biol. 23:813-823(1993).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00267}.
CC -!- TISSUE SPECIFICITY: Expressed at higher levels in dark-grown tissues,
CC such as roots; and at lower levels in light-grown tissues, such as
CC cotyledons and stems.
CC -!- INDUCTION: Regulated by darkness and by a circadian rhythm.
CC -!- SIMILARITY: Belongs to the HMGB family. {ECO:0000305}.
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DR EMBL; L12169; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; S40302; S40302.
DR RefSeq; XP_019182556.1; XM_019327011.1.
DR AlphaFoldDB; P40619; -.
DR SMR; P40619; -.
DR GeneID; 109177607; -.
DR KEGG; ini:109177607; -.
DR OrthoDB; 1641977at2759; -.
DR GO; GO:0000785; C:chromatin; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003682; F:chromatin binding; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:UniProt.
DR Gene3D; 1.10.30.10; -; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR031061; HMGB_plant.
DR PANTHER; PTHR46261; PTHR46261; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; SSF47095; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus.
FT CHAIN 1..144
FT /note="HMG1/2-like protein"
FT /id="PRO_0000048555"
FT DNA_BIND 36..105
FT /note="HMG box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00267"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 85..144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..35
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 86..101
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 121..144
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 144 AA; 16057 MW; B8DE2796FEFE3B0E CRC64;
MKGGKSKAKS DNKLAVKKQA ADTKKTKKAV KDPNKPKRPP SAFFVFMEDF RKTYKEKHPN
NKSVAVVGKA GGDKWKQLTA AEKAPFISKA EKRKQEYEKN LQAYNKKQAA GAAEEEESDK
SRSEVNDDDE DQDGSGEDDS EDDD