HMGYA_SOYBN
ID HMGYA_SOYBN Reviewed; 176 AA.
AC Q00423;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=HMG-Y-related protein A;
DE AltName: Full=Protein SB16A;
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Dare; TISSUE=Embryo;
RX PubMed=1891368; DOI=10.1093/nar/19.17.4768;
RA Laux T., Seurinck J., Goldberg R.B.;
RT "A soybean embryo cDNA encodes a DNA binding protein with histone and HMG-
RT protein-like domains.";
RL Nucleic Acids Res. 19:4768-4768(1991).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00837}.
CC -!- SIMILARITY: Belongs to the HMGA family. {ECO:0000305}.
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DR EMBL; X58246; CAA41201.1; -; mRNA.
DR PIR; S22310; S22310.
DR RefSeq; NP_001238502.1; NM_001251573.1.
DR AlphaFoldDB; Q00423; -.
DR SMR; Q00423; -.
DR STRING; 3847.GLYMA02G41230.1; -.
DR PRIDE; Q00423; -.
DR GeneID; 548080; -.
DR KEGG; gmx:548080; -.
DR eggNOG; ENOG502RXFH; Eukaryota.
DR OrthoDB; 1565299at2759; -.
DR Proteomes; UP000008827; Unplaced.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0000786; C:nucleosome; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProt.
DR GO; GO:0031492; F:nucleosomal DNA binding; IBA:GO_Central.
DR GO; GO:0030261; P:chromosome condensation; IBA:GO_Central.
DR GO; GO:0045910; P:negative regulation of DNA recombination; IBA:GO_Central.
DR GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR017956; AT_hook_DNA-bd_motif.
DR InterPro; IPR005818; Histone_H1/H5_H15.
DR InterPro; IPR000116; HMGA.
DR InterPro; IPR031059; HMGA_plant.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR11467:SF103; PTHR11467:SF103; 1.
DR Pfam; PF00538; Linker_histone; 1.
DR PRINTS; PR00929; ATHOOK.
DR PRINTS; PR00930; HIGHMOBLTYIY.
DR SMART; SM00384; AT_hook; 4.
DR SMART; SM00526; H15; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS51504; H15; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repeat.
FT CHAIN 1..176
FT /note="HMG-Y-related protein A"
FT /id="PRO_0000206713"
FT DOMAIN 11..78
FT /note="H15"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00837"
FT DNA_BIND 84..92
FT /note="A.T hook 1"
FT DNA_BIND 106..114
FT /note="A.T hook 2"
FT DNA_BIND 132..140
FT /note="A.T hook 3"
FT DNA_BIND 156..164
FT /note="A.T hook 4"
FT REGION 64..176
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..123
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 176 AA; 18842 MW; C95C83CCE3D79365 CRC64;
MATEEVNKPQ SLPPYPEMIV KTLEALNEPN GSNKSAISKY IETTYGELPD ATVLGSHLNK
MKDSGELSFK QNNYMKADPN APPKRGRGRP PKPKTPLPPG TVVSPPRPRG RPPKDPNAPP
KSPKAKATPG SGRPRGRPKK VPRSPAVAAP TAVSSGRPRG RPPKVKPQLT EVSVES
