HOLB_HAEIN
ID HOLB_HAEIN Reviewed; 327 AA.
AC P43748;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=DNA polymerase III subunit delta';
DE EC=2.7.7.7;
GN Name=holB; OrderedLocusNames=HI_0455;
OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
OC Pasteurellaceae; Haemophilus.
OX NCBI_TaxID=71421;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51907 / DSM 11121 / KW20 / Rd;
RX PubMed=7542800; DOI=10.1126/science.7542800;
RA Fleischmann R.D., Adams M.D., White O., Clayton R.A., Kirkness E.F.,
RA Kerlavage A.R., Bult C.J., Tomb J.-F., Dougherty B.A., Merrick J.M.,
RA McKenney K., Sutton G.G., FitzHugh W., Fields C.A., Gocayne J.D.,
RA Scott J.D., Shirley R., Liu L.-I., Glodek A., Kelley J.M., Weidman J.F.,
RA Phillips C.A., Spriggs T., Hedblom E., Cotton M.D., Utterback T.R.,
RA Hanna M.C., Nguyen D.T., Saudek D.M., Brandon R.C., Fine L.D.,
RA Fritchman J.L., Fuhrmann J.L., Geoghagen N.S.M., Gnehm C.L., McDonald L.A.,
RA Small K.V., Fraser C.M., Smith H.O., Venter J.C.;
RT "Whole-genome random sequencing and assembly of Haemophilus influenzae
RT Rd.";
RL Science 269:496-512(1995).
RN [2]
RP SEQUENCE REVISION.
RA White O., Clayton R.A., Kerlavage A.R., Fleischmann R.D.;
RL Submitted (SEP-1996) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA polymerase III is a complex, multichain enzyme
CC responsible for most of the replicative synthesis in bacteria. This DNA
CC polymerase also exhibits 3' to 5' exonuclease activity (By similarity).
CC {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SUBUNIT: DNA polymerase III contains a core (composed of alpha, epsilon
CC and theta chains) that associates with a tau subunit. This core
CC dimerizes to form the POLIII' complex. PolIII' associates with the
CC gamma complex (composed of gamma, delta, delta', psi and chi chains)
CC and with the beta chain to form the complete DNA polymerase III complex
CC (By similarity). {ECO:0000250}.
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DR EMBL; L42023; AAC22113.1; -; Genomic_DNA.
DR RefSeq; NP_438616.1; NC_000907.1.
DR RefSeq; WP_010868989.1; NC_000907.1.
DR AlphaFoldDB; P43748; -.
DR SMR; P43748; -.
DR STRING; 71421.HI_0455; -.
DR EnsemblBacteria; AAC22113; AAC22113; HI_0455.
DR KEGG; hin:HI_0455; -.
DR PATRIC; fig|71421.8.peg.475; -.
DR eggNOG; COG0470; Bacteria.
DR HOGENOM; CLU_006229_4_3_6; -.
DR OMA; YSRCQVW; -.
DR PhylomeDB; P43748; -.
DR BioCyc; HINF71421:G1GJ1-471-MON; -.
DR Proteomes; UP000000579; Chromosome.
DR GO; GO:0009360; C:DNA polymerase III complex; IBA:GO_Central.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006261; P:DNA-templated DNA replication; IBA:GO_Central.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR004622; DNA_pol_HolB.
DR InterPro; IPR015199; DNA_pol_III_delta_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF09115; DNApol3-delta_C; 1.
DR SUPFAM; SSF48019; SSF48019; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00678; holB; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-directed DNA polymerase; Nucleotidyltransferase;
KW Reference proteome; Transferase.
FT CHAIN 1..327
FT /note="DNA polymerase III subunit delta'"
FT /id="PRO_0000105514"
SQ SEQUENCE 327 AA; 37039 MW; CEE4D452E371A298 CRC64;
MTALYPWLMP IYHQIAQTFD EGLGHHAVLI KADSGLGVES LFNALAQKIM CVAQGDKPCG
QCHSCHLMQA HSHPDYHELS PINGKDIGVD QVRDINEMVA QHAQQNGNKV VYVQGAERLT
EAAANALLKT LEEPRPNTYF LLQADSSASL LATIYSRCQV WNLSVPNEEI AFEWLKSKSA
VENQEILTAL AMNLGRPLLA LETLQEGFIE QRKNFLRQFW VFYRRRSPLE LLPLFDKERY
VQQVDWILAF LSDCLKHKLE IDSHRQVADL GRGIEQFSDE QTALGLLQAI KIMQKVRSDL
LTINGVNVEL MLLDGLTRLV TEVFETQ