HOOK1_DANRE
ID HOOK1_DANRE Reviewed; 715 AA.
AC Q5TZ80; B3DI93;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Protein Hook homolog 1;
GN Name=hook1; ORFNames=si:dkey-183n20.14;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May function to promote vesicle trafficking and/or fusion.
CC {ECO:0000250}.
CC -!- SUBUNIT: Interacts with microtubules. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Cytoplasm, cytoskeleton
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the hook family. {ECO:0000305}.
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DR EMBL; BX322665; CAH69008.1; -; Genomic_DNA.
DR EMBL; BC163044; AAI63044.1; -; mRNA.
DR RefSeq; NP_001038663.1; NM_001045198.1.
DR AlphaFoldDB; Q5TZ80; -.
DR SMR; Q5TZ80; -.
DR STRING; 7955.ENSDARP00000063051; -.
DR PaxDb; Q5TZ80; -.
DR PRIDE; Q5TZ80; -.
DR Ensembl; ENSDART00000063052; ENSDARP00000063051; ENSDARG00000042946.
DR GeneID; 570393; -.
DR KEGG; dre:570393; -.
DR CTD; 51361; -.
DR ZFIN; ZDB-GENE-041001-159; hook1.
DR eggNOG; ENOG502QQM8; Eukaryota.
DR GeneTree; ENSGT00940000159251; -.
DR HOGENOM; CLU_011214_1_0_1; -.
DR InParanoid; Q5TZ80; -.
DR OMA; LRYSQMQ; -.
DR OrthoDB; 398210at2759; -.
DR PhylomeDB; Q5TZ80; -.
DR TreeFam; TF320231; -.
DR PRO; PR:Q5TZ80; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 20.
DR Bgee; ENSDARG00000042946; Expressed in retina and 18 other tissues.
DR ExpressionAtlas; Q5TZ80; baseline and differential.
DR GO; GO:0005813; C:centrosome; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IEA:GOC.
DR GO; GO:0070695; C:FHF complex; ISS:UniProtKB.
DR GO; GO:0005874; C:microtubule; IEA:UniProtKB-KW.
DR GO; GO:0051959; F:dynein light intermediate chain binding; IBA:GO_Central.
DR GO; GO:0008017; F:microtubule binding; IBA:GO_Central.
DR GO; GO:0031122; P:cytoplasmic microtubule organization; IBA:GO_Central.
DR GO; GO:0030705; P:cytoskeleton-dependent intracellular transport; IBA:GO_Central.
DR GO; GO:0045022; P:early endosome to late endosome transport; ISS:UniProtKB.
DR GO; GO:0007032; P:endosome organization; ISS:UniProtKB.
DR GO; GO:0008333; P:endosome to lysosome transport; ISS:UniProtKB.
DR GO; GO:0007040; P:lysosome organization; ISS:UniProtKB.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 1.10.418.10; -; 1.
DR InterPro; IPR001715; CH-domain.
DR InterPro; IPR036872; CH_dom_sf.
DR InterPro; IPR008636; Hook_C.
DR InterPro; IPR043936; HOOK_N.
DR Pfam; PF05622; HOOK; 1.
DR Pfam; PF19047; HOOK_N; 1.
DR PROSITE; PS50021; CH; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Cytoplasm; Cytoskeleton; Microtubule; Protein transport;
KW Reference proteome; Transport.
FT CHAIN 1..715
FT /note="Protein Hook homolog 1"
FT /id="PRO_0000379054"
FT DOMAIN 6..122
FT /note="Calponin-homology (CH)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00044"
FT COILED 167..434
FT /evidence="ECO:0000255"
FT COILED 463..656
FT /evidence="ECO:0000255"
FT CONFLICT 411
FT /note="I -> F (in Ref. 2; AAI63044)"
FT /evidence="ECO:0000305"
FT CONFLICT 605
FT /note="A -> P (in Ref. 2; AAI63044)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 715 AA; 83115 MW; DDA952C364E54C30 CRC64;
MDLKKTVLCE SLIIWLQTFK TAAPCKTVED LTSGAAMSQA LHQIDPSWFS ESWLARIKED
VGDNVRLKMN NLKKILQMIV DYYNEVLAQQ MSDFPLPDLM RVVEQSDQVE LGRLLQLILG
CAVKCDRKQE YIQIIMTLEE SVQHVVMTAI QELMSRESVS QLGAEPAGDT EQQLKKALED
LTEVMAEKEE LAQRCQELDM QVTVLQEERN SLLAENDLLT DRSSQLETFD DPSTPSGRKH
SQLQFQLEQL QEENFRLEAA KDDYRIHCEE LEKQLVELQH RNDELTSLAE ESRSLKDELD
ILRSCSDRAV KLEASVETYR KKLEDLSDLR RQMKALEEKN MTYMHNTVSL EEELRKANAA
RAQLETYKRQ VQELHKKLSD ESRRADNLVF EMKKLQEKYD ALVKERERIS IERDTLRETN
EELRCTQAQQ DQLLLAGKYQ TGSPSHDNLA AEMLPIEYRE KFIRLQHENK MLRLQQEESE
KQRITELQQQ LEEARRGRSQ LDTDNRLNRE RISELQQQVE DLQKALQTQG AKPDDSHLKR
KLDAHMVQLN EAQDEIMKKK ELLEDLQPDA TQTSVKMDEL MAALKKKDED MRAMEDRYKM
YLEKARDVIR ALDPKLNPAS AEIQSLKVQL SDKDKKIIAL ERECEQAKLR EYEEKLIVTA
WYNKSLNFQK MAIESRLSGR ANSLVPPGQS FLAQQRQVTN ARRTMSINVP ASSSK