HOX24_ORYSI
ID HOX24_ORYSI Reviewed; 262 AA.
AC A2X7U1; A5JPW1; B8AG15; Q07966;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 2.
DT 25-MAY-2022, entry version 89.
DE RecName: Full=Homeobox-leucine zipper protein HOX24;
DE AltName: Full=HD-ZIP protein HOX24;
DE AltName: Full=Homeodomain transcription factor HOX24;
DE AltName: Full=OsHox24;
GN Name=HOX24; ORFNames=OsI_08284;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-101.
RC STRAIN=cv. IR36;
RX PubMed=1347144; DOI=10.1007/bf00292702;
RA Zhao X., Kochert G.;
RT "Characterization and genetic mapping of a short, highly repeated,
RT interspersed DNA sequence from rice (Oryza sativa L.).";
RL Mol. Gen. Genet. 231:353-359(1992).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 93-244, TISSUE SPECIFICITY, INDUCTION, GENE
RP FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Minghui 86;
RX PubMed=17999151; DOI=10.1007/s11103-007-9255-7;
RA Agalou A., Purwantomo S., Oevernaes E., Johannesson H., Zhu X., Estiati A.,
RA de Kam R.J., Engstroem P., Slamet-Loedin I.H., Zhu Z., Wang M., Xiong L.,
RA Meijer A.H., Ouwerkerk P.B.F.;
RT "A genome-wide survey of HD-Zip genes in rice and analysis of drought-
RT responsive family members.";
RL Plant Mol. Biol. 66:87-103(2008).
CC -!- FUNCTION: Probable transcription factor. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in roots and panicles.
CC {ECO:0000269|PubMed:17999151}.
CC -!- INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class I subfamily.
CC {ECO:0000305}.
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DR EMBL; CM000127; EEC73698.1; -; Genomic_DNA.
DR EMBL; X64775; CAA46022.1; -; Genomic_DNA.
DR EMBL; EF555546; ABQ57287.1; -; mRNA.
DR PIR; S20482; S20482.
DR AlphaFoldDB; A2X7U1; -.
DR SMR; A2X7U1; -.
DR STRING; 39946.A2X7U1; -.
DR EnsemblPlants; BGIOSGA008720-TA; BGIOSGA008720-PA; BGIOSGA008720.
DR Gramene; BGIOSGA008720-TA; BGIOSGA008720-PA; BGIOSGA008720.
DR HOGENOM; CLU_071718_1_0_1; -.
DR OMA; WDTWPLL; -.
DR Proteomes; UP000007015; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR045224; HDZip_class_I_plant.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR003106; Leu_zip_homeo.
DR PANTHER; PTHR24326; PTHR24326; 1.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Homeobox; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..262
FT /note="Homeobox-leucine zipper protein HOX24"
FT /id="PRO_0000331720"
FT DNA_BIND 61..122
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 44..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 121..165
FT /note="Leucine-zipper"
FT REGION 162..189
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 95..96
FT /note="EL -> DV (in Ref. 2; CAA46022)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 262 AA; 28538 MW; 49F5C7C401C66CAA CRC64;
MESDCQFLVA PPQPHMYYDT AAAAVDEAQF LRQMVAAADH HAAAAGRGGG DGDGGGGGGG
GGGERKRRFT EEQVRSLETT FHARRAKLEP REKAELAREL GLQPRQVAIW FQNKRARWRS
KQIEHDYAAL RAQYDALHAR VESLRQEKLA LAAQVDELRG KLNERQDQSG SCDGGGAEGD
DDDKRNSVMN ASSSGLVEED YVSCLAVPVV DVSEDGSAAC GGSSYEYDHH LDYLGGGQLP
DPFCGMPDLW ETWPMVEWNA VA
