HPI_DEIRA
ID HPI_DEIRA Reviewed; 948 AA.
AC P56867;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 90.
DE RecName: Full=Hexagonally packed intermediate-layer surface protein;
DE Flags: Precursor;
GN Name=hpi; OrderedLocusNames=DR_2508;
OS Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG
OS 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422).
OC Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae;
OC Deinococcus.
OX NCBI_TaxID=243230;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
RC 9279 / R1 / VKM B-1422;
RX PubMed=10567266; DOI=10.1126/science.286.5444.1571;
RA White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D.,
RA Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L.,
RA Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M.,
RA Vamathevan J.J., Lam P., McDonald L.A., Utterback T.R., Zalewski C.,
RA Makarova K.S., Aravind L., Daly M.J., Minton K.W., Fleischmann R.D.,
RA Ketchum K.A., Nelson K.E., Salzberg S.L., Smith H.O., Venter J.C.,
RA Fraser C.M.;
RT "Genome sequence of the radioresistant bacterium Deinococcus radiodurans
RT R1.";
RL Science 286:1571-1577(1999).
CC -!- FUNCTION: Shape maintenance, possible protection from noxious enzymes
CC or exogenous and unsettling DNA, and may mediate homotypic cell-cell
CC contacts. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall, S-layer {ECO:0000250}.
CC Note=This bacterium is covered by a S-layer with hexagonal symmetry.
CC {ECO:0000250}.
CC -!- PTM: Glycosylated. Contains tightly bound reducing sugars (six per
CC polypeptide chain) and fatty acids (covalently bound and located in the
CC N-terminal region) (By similarity). {ECO:0000250}.
CC -!- MISCELLANEOUS: The hydrophilic C-terminal region rich in aromatic AA
CC could be engaged in interactions with nucleic acids, and the bound
CC fatty acids and the N-terminal region could serve to anchor the layer
CC to the outer membrane of D.radiodurans. HPI layer contain about 30%
CC beta structure and virtually no alpha helix (By similarity).
CC {ECO:0000250}.
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DR EMBL; AE000513; AAF12049.1; -; Genomic_DNA.
DR PIR; C75265; C75265.
DR RefSeq; NP_296228.1; NC_001263.1.
DR RefSeq; WP_010889133.1; NZ_CP015081.1.
DR AlphaFoldDB; P56867; -.
DR STRING; 243230.DR_2508; -.
DR EnsemblBacteria; AAF12049; AAF12049; DR_2508.
DR KEGG; dra:DR_2508; -.
DR PATRIC; fig|243230.17.peg.2748; -.
DR HOGENOM; CLU_310310_0_0_0; -.
DR OrthoDB; 285019at2; -.
DR Proteomes; UP000002524; Chromosome I.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0030115; C:S-layer; IEA:UniProtKB-SubCell.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Cell wall; Cell wall biogenesis/degradation; Disulfide bond; Glycoprotein;
KW Lipoprotein; Reference proteome; S-layer; Secreted; Signal.
FT SIGNAL 1..17
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT CHAIN 18..948
FT /note="Hexagonally packed intermediate-layer surface
FT protein"
FT /id="PRO_0000032623"
FT DISULFID 168..187
FT /evidence="ECO:0000250"
FT DISULFID 554..666
FT /evidence="ECO:0000250"
SQ SEQUENCE 948 AA; 99356 MW; 5CF0619F7AC97919 CRC64;
MKKNIALMAL TGILTLASCG QNGTGTTPTA DACATANTCS VTVNISGVSS ADFDVTMDGK
TTSMTLSNGQ KLPVAKTGTV TLTPKAKDGY TTPAAQSTTI SSTNLTPSVN FAYTTVPSTG
NGNGNGGTTP TQPFTLNITS PTNGAAATTG TPIRVVFTSS VALSSATCKI GNSAAVNAQV
SSTGGYCDVT PTTAGGGLIT VTGTANGQTV SSTVTVDVKA PVVDNRYGTV TPAGDQELTL
TNEGIVKDAD NGWRRLGQGV STPSDPNGNV DIYVKGTVNF SVNAAAGSKV EVFLARTTGS
DVPTNDDVQA GDVLRSVAST SGTETFSLDS RRLAEFDGVR KWIVVRINGT QVTYQPVIAD
NKGPQQPDPE LNGVQNAYSN ILNNYNNSGL TYVRGDVNVF TGNPSLQDRE FGQAPLGSSF
VQRRPSGFES IRYYLVPETA FGNKALQESD EMLRAKAIKS VATVVSAPVL EPGTVKATSF
SRVIGSGATS TVTPKAQDNV TYRVYAISRD QLGNETASAT YELVRFDNVG PTITGSVIRD
TSDLPFASQE PERCLSDIAT ITLGGITDNA GGVGLNPGQG LTFTLGGRQI QAGQFDTNQL
ADGEYTIGFN SLTDALGNPV VSAPTNAKVY IDNTDPTVNF NRAVMQGTFA SGERVSVESD
ASDGGCGVYE TRLFWDTDNG VVDDATTTPA IGHPVQFARQ RVTDGAKADS LNAGWNALQL
PNGAGAVYLR ALVVDRAGNA TISTTPIVVN AKITNQARPL LGGFDAFKRN ASAQFMSNSN
AISGVNGTAV TPNTTANSAL DNILSLDSVG TLTTNAYLPR GATETAITEK IRNVGAYGRF
DATQWNRIRD YQLNTDPTLR SAYVNAGNLA NQRGNNWRIR TPWVELGSSD TANTQQKFDF
NSDLLNDFYF GRTFGNNDNV NLFSYDQFNG IVSGTAGAYS FYGETVQK