HPO40_CAEEL
ID HPO40_CAEEL Reviewed; 782 AA.
AC Q23647;
DT 07-OCT-2020, integrated into UniProtKB/Swiss-Prot.
DT 26-JUN-2007, sequence version 2.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Hypersensitive to pore-forming toxin protein 40 {ECO:0000312|WormBase:ZK856.12};
GN Name=hpo-40 {ECO:0000312|WormBase:ZK856.12};
GN ORFNames=ZK856.12 {ECO:0000312|WormBase:ZK856.12};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239 {ECO:0000312|Proteomes:UP000001940};
RN [1] {ECO:0000312|Proteomes:UP000001940}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2 {ECO:0000312|Proteomes:UP000001940};
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2] {ECO:0000305}
RP SUBCELLULAR LOCATION, AND DOMAIN.
RX PubMed=32338603; DOI=10.7554/elife.56731;
RA Manage K.I., Rogers A.K., Wallis D.C., Uebel C.J., Anderson D.C.,
RA Nguyen D.A.H., Arca K., Brown K.C., Cordeiro Rodrigues R.J.,
RA de Albuquerque B.F.M., Ketting R.F., Montgomery T.A., Phillips C.M.;
RT "A Tudor domain protein, SIMR-1, promotes siRNA production at piRNA-
RT targeted mRNAs in C. elegans.";
RL Elife 9:0-0(2020).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, perinuclear region
CC {ECO:0000269|PubMed:32338603}. Note=Localizes to perinuclear foci in
CC germ cells (PubMed:32338603). Its localization at perinuclear foci is
CC either adjacent to or co-localized with mutator complex protein mut-16
CC (PubMed:32338603). {ECO:0000269|PubMed:32338603}.
CC -!- DOMAIN: Tudor domain specifically binds peptides with symmetrically
CC dimethylated arginines (sDMA) and may facilitate protein-protein
CC interactions. {ECO:0000303|PubMed:32338603}.
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DR EMBL; BX284605; CAA94860.2; -; Genomic_DNA.
DR PIR; T28051; T28051.
DR RefSeq; NP_505628.2; NM_073227.3.
DR AlphaFoldDB; Q23647; -.
DR STRING; 6239.ZK856.12.1; -.
DR EPD; Q23647; -.
DR PaxDb; Q23647; -.
DR PeptideAtlas; Q23647; -.
DR EnsemblMetazoa; ZK856.12.1; ZK856.12.1; WBGene00014113.
DR GeneID; 179421; -.
DR KEGG; cel:CELE_ZK856.12; -.
DR UCSC; ZK856.12; c. elegans.
DR CTD; 179421; -.
DR WormBase; ZK856.12; CE41097; WBGene00014113; hpo-40.
DR eggNOG; ENOG502RT5V; Eukaryota.
DR GeneTree; ENSGT00970000196511; -.
DR HOGENOM; CLU_358340_0_0_1; -.
DR InParanoid; Q23647; -.
DR OMA; YPCALHC; -.
DR OrthoDB; 1712752at2759; -.
DR PhylomeDB; Q23647; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00014113; Expressed in adult organism and 3 other tissues.
DR GO; GO:1990633; C:mutator focus; IDA:UniProtKB.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
PE 4: Predicted;
KW Cytoplasm; Reference proteome.
FT CHAIN 1..782
FT /note="Hypersensitive to pore-forming toxin protein 40"
FT /id="PRO_0000450824"
FT DOMAIN 138..203
FT /note="Tudor; degenerate"
FT /evidence="ECO:0000305|PubMed:32338603"
FT REGION 332..351
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 413..448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 472..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 617..672
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..349
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 617..633
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 637..666
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 782 AA; 87435 MW; BAA3ACD993E44C6B CRC64;
MNSQQEWEHA YSLAERMYNK QAPTKREELN PTERVICSRF ETIFDYDPFK DEYTFRDQAL
LFSTPVQPKC RTVAEADLHE LKENTAKLNI PMPSYINICP IYALLPFTVL VFNNSQHAHK
SLSDDMERAA ATFRNPHESE IVPGAMYIFK QKHGKAYRCI ILSEDGDMNI PDAERKYLVA
FIDNVQIVSV KQKTLFVSDQ FSIKDYPCAL HCARIVGISA IRKSYVSGMN QFILNFYDAK
EKRKAGMFAF IYKLDKEEKK LVIDYPSLLG TPKTTSTEIR TAVGHQIVAS KDPVSLTFEQ
LNKKEVPEFK YLNSTDDDSD VELDLIEHDT KSVNPVASSH PTSSSMDDCP YGRASIARAK
DYQLRLPPHS QKGLSSSSLL GSSYPVSNSI KNDITKQSES NRADATNISF SSFESTKSDI
SPQNNQNVEE TSTPTVPPNS TIQENEEDEI MSPASIIRAP SRLAGSLNKV SIERPNTPLP
TSSKNSEHNM SEISTYEASS ISSHHLVPQS PSVPKTNYTV PVVQRPLTAP EKFRDPFGGP
GSSDILNTKM LCSEKNIVPS NKFGRQISPG KDDKNENYQY SRMETKPQTL FAPVLDENQR
QSSSSNMMCQ IPDISSVAQG SNAPKTAPND SVNSVAPDDI HETDKRGNHC KSVTEDPKDN
KDPTAVTTLE DPDINDENFS VQSICSETFV ETDQKLMEVE TGADAFTESI TDQFAQMSEG
LKKLAINLAD SVRTAAIEKN HDAFIANIHA MEIISKKVPD DIDKRFWKMK IVEARKLEAA
FD