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HPR3_ARATH
ID   HPR3_ARATH              Reviewed;         323 AA.
AC   Q9LE33;
DT   31-OCT-2012, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 144.
DE   RecName: Full=Glyoxylate/hydroxypyruvate reductase HPR3;
DE            EC=1.1.1.79 {ECO:0000305|PubMed:21205613};
DE            EC=1.1.1.81 {ECO:0000305|PubMed:21205613};
DE   AltName: Full=NAD(P)H-dependent hydroxypyruvate reductase 3;
DE            Short=AtHPR3;
DE            Short=HPR 3;
GN   Name=HPR3; OrderedLocusNames=At1g12550; ORFNames=F5O11.29, T12C24.9;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Cheuk R.F., Chen H., Kim C.J., Shinn P., Carninci P., Hayashizaki Y.,
RA   Ishida J., Kamiya A., Kawai J., Narusaka M., Sakurai T., Satou M., Seki M.,
RA   Shinozaki K., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   FUNCTION, CATALYTIC ACTIVITY, DISRUPTION PHENOTYPE, AND ACTIVITY
RP   REGULATION.
RC   STRAIN=cv. Columbia, and cv. Landsberg erecta;
RX   PubMed=21205613; DOI=10.1104/pp.110.166538;
RA   Timm S., Florian A., Jahnke K., Nunes-Nesi A., Fernie A.R., Bauwe H.;
RT   "The hydroxypyruvate-reducing system in Arabidopsis: multiple enzymes for
RT   the same end.";
RL   Plant Physiol. 155:694-705(2011).
CC   -!- FUNCTION: Catalyzes the NADPH-dependent reduction of glyoxylate and
CC       hydroxypyruvate (HP) into glycolate and glycerate. Mostly active in the
CC       presence of NADPH and glyoxylate. {ECO:0000269|PubMed:21205613}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=glycolate + NADP(+) = glyoxylate + H(+) + NADPH;
CC         Xref=Rhea:RHEA:10992, ChEBI:CHEBI:15378, ChEBI:CHEBI:29805,
CC         ChEBI:CHEBI:36655, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349; EC=1.1.1.79;
CC         Evidence={ECO:0000305|PubMed:21205613};
CC       PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:10994;
CC         Evidence={ECO:0000305|PubMed:21205613};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=(R)-glycerate + NADP(+) = 3-hydroxypyruvate + H(+) + NADPH;
CC         Xref=Rhea:RHEA:18657, ChEBI:CHEBI:15378, ChEBI:CHEBI:16659,
CC         ChEBI:CHEBI:17180, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349; EC=1.1.1.81;
CC         Evidence={ECO:0000305|PubMed:21205613};
CC       PhysiologicalDirection=right-to-left; Xref=Rhea:RHEA:18659;
CC         Evidence={ECO:0000305|PubMed:21205613};
CC   -!- ACTIVITY REGULATION: Inhibited by oxalate.
CC       {ECO:0000269|PubMed:21205613}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000250}.
CC   -!- DISRUPTION PHENOTYPE: Disrupted photorespiratory flux leading to a
CC       slight altered leaf concentrations of the photorespiratory
CC       intermediates hydroxypyruvate (HP), glycerate, and glycine.
CC       {ECO:0000269|PubMed:21205613}.
CC   -!- SIMILARITY: Belongs to the D-isomer specific 2-hydroxyacid
CC       dehydrogenase family. GyaR subfamily. {ECO:0000305}.
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DR   EMBL; AC025416; AAF79644.1; -; Genomic_DNA.
DR   EMBL; AC025417; AAF88077.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE28896.1; -; Genomic_DNA.
DR   EMBL; BT011735; AAS49098.1; -; mRNA.
DR   EMBL; AK221605; BAD95166.1; -; mRNA.
DR   RefSeq; NP_172716.1; NM_101126.3.
DR   AlphaFoldDB; Q9LE33; -.
DR   SMR; Q9LE33; -.
DR   STRING; 3702.AT1G12550.1; -.
DR   PaxDb; Q9LE33; -.
DR   PRIDE; Q9LE33; -.
DR   ProteomicsDB; 230233; -.
DR   EnsemblPlants; AT1G12550.1; AT1G12550.1; AT1G12550.
DR   GeneID; 837811; -.
DR   Gramene; AT1G12550.1; AT1G12550.1; AT1G12550.
DR   KEGG; ath:AT1G12550; -.
DR   Araport; AT1G12550; -.
DR   TAIR; locus:2034665; AT1G12550.
DR   eggNOG; KOG0069; Eukaryota.
DR   HOGENOM; CLU_019796_1_2_1; -.
DR   InParanoid; Q9LE33; -.
DR   OMA; KVISCHS; -.
DR   OrthoDB; 1378766at2759; -.
DR   PhylomeDB; Q9LE33; -.
DR   BioCyc; ARA:AT1G12550-MON; -.
DR   BioCyc; MetaCyc:AT1G12550-MON; -.
DR   BRENDA; 1.1.1.81; 399.
DR   PRO; PR:Q9LE33; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9LE33; baseline and differential.
DR   Genevisible; Q9LE33; AT.
DR   GO; GO:0030267; F:glyoxylate reductase (NADP+) activity; IDA:TAIR.
DR   GO; GO:0016618; F:hydroxypyruvate reductase activity; IDA:TAIR.
DR   GO; GO:0051287; F:NAD binding; IEA:InterPro.
DR   GO; GO:0009854; P:oxidative photosynthetic carbon pathway; IEA:UniProtKB-KW.
DR   GO; GO:0009853; P:photorespiration; IMP:TAIR.
DR   InterPro; IPR006139; D-isomer_2_OHA_DH_cat_dom.
DR   InterPro; IPR006140; D-isomer_DH_NAD-bd.
DR   InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR   Pfam; PF00389; 2-Hacid_dh; 1.
DR   Pfam; PF02826; 2-Hacid_dh_C; 1.
DR   SUPFAM; SSF51735; SSF51735; 1.
PE   1: Evidence at protein level;
KW   Glycolate pathway; NAD; NADP; Oxidoreductase; Photorespiration; Pyruvate;
KW   Reference proteome.
FT   CHAIN           1..323
FT                   /note="Glyoxylate/hydroxypyruvate reductase HPR3"
FT                   /id="PRO_0000419953"
FT   ACT_SITE        240
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        269
FT                   /evidence="ECO:0000250"
FT   ACT_SITE        287
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000250"
FT   BINDING         160..163
FT                   /ligand="NADP(+)"
FT                   /ligand_id="ChEBI:CHEBI:58349"
FT                   /evidence="ECO:0000250"
FT   BINDING         182..184
FT                   /ligand="NADP(+)"
FT                   /ligand_id="ChEBI:CHEBI:58349"
FT                   /evidence="ECO:0000250"
FT   BINDING         238..240
FT                   /ligand="NADP(+)"
FT                   /ligand_id="ChEBI:CHEBI:58349"
FT                   /evidence="ECO:0000250"
FT   BINDING         287..289
FT                   /ligand="NADP(+)"
FT                   /ligand_id="ChEBI:CHEBI:58349"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   323 AA;  34912 MW;  258FB419B9D67B9A CRC64;
     MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG
     RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI TNAGNAFSDD VADCAVGLLI
     SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY
     NSRSQKQSSP YRYYSDILSL AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR
     GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
     QIALANLKAF FSNRPLLSPV QLD
 
 
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