HRDE2_CAEEL
ID HRDE2_CAEEL Reviewed; 305 AA.
AC Q22058;
DT 27-SEP-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Protein hrde-2 {ECO:0000305};
DE AltName: Full=Heritable RNAi deficient protein 2 {ECO:0000312|WormBase:T01C3.9};
GN Name=hrde-2 {ECO:0000303|PubMed:28533440};
GN ORFNames=T01C3.9 {ECO:0000312|WormBase:T01C3.9};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239 {ECO:0000312|Proteomes:UP000001940};
RN [1] {ECO:0000312|Proteomes:UP000001940}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2 {ECO:0000312|Proteomes:UP000001940};
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2] {ECO:0000305}
RP FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, AND DISRUPTION
RP PHENOTYPE.
RX PubMed=28533440; DOI=10.1534/genetics.116.198812;
RA Spracklin G., Fields B., Wan G., Vijayendran D., Wallig A., Shukla A.,
RA Kennedy S.;
RT "Identification and characterization of Caenorhabditis elegans RNAi
RT inheritance machinery.";
RL Genetics 206:1403-1416(2017).
CC -!- FUNCTION: Plays a role in germline RNA interference (RNAi), and in
CC particular is required for piwi-interacting RNA (piRNA) gene silencing.
CC Facilitates the binding of the argonaut protein hrde-1 to small
CC interfering RNAs (siRNAs) targets that are required for
CC transgenerational epigenetic inheritance and germline immortality.
CC {ECO:0000269|PubMed:28533440}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:28533440}.
CC -!- TISSUE SPECIFICITY: Expressed throughout the male and female germline.
CC {ECO:0000269|PubMed:28533440}.
CC -!- DISRUPTION PHENOTYPE: Mortal germline (Mrt) phenotype in which there is
CC a progressive decline in fertility with each generation at 25 degrees
CC Celsius, and after 2 to 3 generations the brood size is 25% that of
CC wild-type counterparts. Fertility in these mutants may be restored when
CC transferred to a 20 degrees Celsius environment. Defective RNAi
CC inheritance. {ECO:0000269|PubMed:28533440}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BX284605; CAB01662.1; -; Genomic_DNA.
DR PIR; T24283; T24283.
DR RefSeq; NP_506693.1; NM_074292.4.
DR AlphaFoldDB; Q22058; -.
DR SMR; Q22058; -.
DR IntAct; Q22058; 1.
DR STRING; 6239.T01C3.9; -.
DR PaxDb; Q22058; -.
DR EnsemblMetazoa; T01C3.9.1; T01C3.9.1; WBGene00011324.
DR GeneID; 180001; -.
DR KEGG; cel:CELE_T01C3.9; -.
DR UCSC; T01C3.9; c. elegans.
DR CTD; 180001; -.
DR WormBase; T01C3.9; CE12924; WBGene00011324; hrde-2.
DR eggNOG; ENOG502TIP7; Eukaryota.
DR HOGENOM; CLU_855898_0_0_1; -.
DR InParanoid; Q22058; -.
DR OMA; DEGHEYC; -.
DR OrthoDB; 1810116at2759; -.
DR PRO; PR:Q22058; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00011324; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; RNA-mediated gene silencing.
FT CHAIN 1..305
FT /note="Protein hrde-2"
FT /evidence="ECO:0000305"
FT /id="PRO_0000441622"
FT REGION 211..233
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 267..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 211..228
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 270..284
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 285..305
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 305 AA; 34662 MW; 77D836A08CCF5DF3 CRC64;
MSQNSDTFDS GLQMEVHKMA EADNSSVQQK FDAIRDYIGR KETTIILCEH DDSRKIKLTL
NKQRMESSMF LTEMPDGGIQ EKTKFHRNGL AVCSYNAFDE VDLPLADSYI FYGLPSNVEA
FPRMLHGIEK SAHKENKIVF IDIVVSILEK IQIKVVSFEL YNRKCTVPTW VAELVITYCA
PIEEQQQRIE EIRRTRASVP VAISDAANGS AEMVPSNTTG SSGSPMSTAP VPAAKKEKVQ
YESIRQIRPN AQGRYFVPAR MINMDIEMSN DEYSPDESEN DENEYDYENA ARYDDGYDEG
HEYCQ