HRDL1_CAEBR
ID HRDL1_CAEBR Reviewed; 578 AA.
AC A8WWR3;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=E3 ubiquitin-protein ligase hrd-like protein 1;
GN Name=hrdl-1 {ECO:0000312|EMBL:CAP24624.1}; ORFNames=CBG03795;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1] {ECO:0000312|EMBL:CAP24624.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000312|EMBL:CAP24624.1};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Proposed to have a role in neuroprotection.
CC {ECO:0000250|UniProtKB:P90859}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Multi-pass membrane
CC protein {ECO:0000255}.
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DR EMBL; HE600906; CAP24624.1; -; Genomic_DNA.
DR RefSeq; XP_002639237.1; XM_002639191.1.
DR AlphaFoldDB; A8WWR3; -.
DR SMR; A8WWR3; -.
DR STRING; 6238.CBG03795; -.
DR EnsemblMetazoa; CBG03795.1; CBG03795.1; WBGene00026578.
DR GeneID; 8581231; -.
DR KEGG; cbr:CBG_03795; -.
DR CTD; 8581231; -.
DR WormBase; CBG03795; CBP14918; WBGene00026578; Cbr-hrdl-1.
DR eggNOG; KOG0802; Eukaryota.
DR HOGENOM; CLU_015061_1_0_1; -.
DR InParanoid; A8WWR3; -.
DR OMA; WAWFTAL; -.
DR OrthoDB; 897451at2759; -.
DR Proteomes; UP000008549; Chromosome I.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005783; C:endoplasmic reticulum; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0000151; C:ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043130; F:ubiquitin binding; IEA:InterPro.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0030968; P:endoplasmic reticulum unfolded protein response; IBA:GO_Central.
DR GO; GO:0035264; P:multicellular organism growth; IEA:EnsemblMetazoa.
DR GO; GO:0070936; P:protein K48-linked ubiquitination; IBA:GO_Central.
DR GO; GO:0016567; P:protein ubiquitination; IBA:GO_Central.
DR GO; GO:1901214; P:regulation of neuron death; ISS:UniProtKB.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR003892; CUE.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR Pfam; PF02845; CUE; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00546; CUE; 1.
DR SMART; SM00184; RING; 1.
DR PROSITE; PS51140; CUE; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Membrane; Metal-binding; Reference proteome; Transmembrane;
KW Transmembrane helix; Zinc; Zinc-finger.
FT CHAIN 1..578
FT /note="E3 ubiquitin-protein ligase hrd-like protein 1"
FT /id="PRO_0000370218"
FT TRANSMEM 32..52
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 76..96
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 101..121
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 134..154
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 163..183
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 202..222
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 230..250
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 286..306
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 447..489
FT /note="CUE"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00468"
FT ZN_FING 350..388
FT /note="RING-type; atypical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
FT CARBOHYD 68
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 492
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 578 AA; 66025 MW; 0A4E47141A211D27 CRC64;
MNRGNPQALR HPQVPLGIAN IIGRSTFPSV EGYLALSLCV AFIASASVFT HFHSQPEIKR
LLEEELRNNT RLTTAFGINI DTIAGSTVFQ MAHYILTDTT LIWVAINSYF AILAMCTKLI
IKLTFKELSR QEEVAARQAF LSYILLTIVY LSVVTGPQKG HRVMPWMIWG GVCGFLSHLQ
FVTCQRLKYT SPSCDRGSQR VSFISLFLFF VSIAMTFMVS RFQQHLEWQP AVLLYFDCLL
AVFRSTYILF RCISSSRVFS FNPDSVRHFN YWLELATNFA CELLQFLSYA QLFVFAPGLN
LTSIFFLYHM KLTYNCMREQ LGRHRTHKKI FEHIESAYPS VKAANSDDRC IVCWELLGTS
RRLPCSHQFH DWCLMWWLAQ DSSCPTCRYV IPSPQEEASR TDSGNGNTMF RFNGRTFGFF
TLPSFTVEVG SSFGNIFGRA AEPTQEQLQS MLETVLEMFP QMSPETILAD LRQSGSAQST
IENILEGRMG LNASLIPGVL DEDLSDDTDN ELEYEEHVEV VQEPDRTRQR TWTKLSSSSG
EAELSYYEIQ RANMIETYRR KYLASDKAAD LRAMGITE