HS178_ORYSJ
ID HS178_ORYSJ Reviewed; 164 AA.
AC Q0DY72; Q6ZFX4;
DT 03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT 03-NOV-2009, sequence version 2.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=17.8 kDa heat shock protein;
DE Short=OsHsp17.8;
GN Name=HSP17.8; OrderedLocusNames=Os02g0711300, LOC_Os02g48140;
GN ORFNames=OJ1038_A06.24, OJ1311_H06.34;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [5]
RP INDUCTION, AND GENE FAMILY.
RX PubMed=19703271; DOI=10.1186/1471-2164-10-393;
RA Sarkar N.K., Kim Y.-K., Grover A.;
RT "Rice sHsp genes: genomic organization and expression profiling under
RT stress and development.";
RL BMC Genomics 10:393-393(2009).
CC -!- SUBUNIT: May form oligomeric structures.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q0DY72-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q0DY72-2; Sequence=VSP_038273;
CC -!- INDUCTION: By heat shock. {ECO:0000269|PubMed:19703271}.
CC -!- SIMILARITY: Belongs to the small heat shock protein (HSP20) family.
CC {ECO:0000255|PROSITE-ProRule:PRU00285}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD07499.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAD07781.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP003983; BAD07499.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP004161; BAD07781.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008208; BAF09816.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS80569.1; -; Genomic_DNA.
DR EMBL; AK107963; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015626929.1; XM_015771443.1. [Q0DY72-1]
DR AlphaFoldDB; Q0DY72; -.
DR SMR; Q0DY72; -.
DR STRING; 4530.OS02T0711300-01; -.
DR PaxDb; Q0DY72; -.
DR PRIDE; Q0DY72; -.
DR EnsemblPlants; Os02t0711300-01; Os02t0711300-01; Os02g0711300. [Q0DY72-2]
DR GeneID; 4330496; -.
DR Gramene; Os02t0711300-01; Os02t0711300-01; Os02g0711300. [Q0DY72-2]
DR KEGG; osa:4330496; -.
DR eggNOG; KOG0710; Eukaryota.
DR HOGENOM; CLU_1471913_0_0_1; -.
DR InParanoid; Q0DY72; -.
DR OMA; AHVFRMD; -.
DR OrthoDB; 1187096at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q0DY72; OS.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0043621; F:protein self-association; IBA:GO_Central.
DR GO; GO:0051082; F:unfolded protein binding; IBA:GO_Central.
DR GO; GO:0051259; P:protein complex oligomerization; IBA:GO_Central.
DR GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR GO; GO:0009408; P:response to heat; IEP:UniProtKB.
DR GO; GO:0042542; P:response to hydrogen peroxide; IBA:GO_Central.
DR GO; GO:0009651; P:response to salt stress; IBA:GO_Central.
DR Gene3D; 2.60.40.790; -; 1.
DR InterPro; IPR002068; A-crystallin/Hsp20_dom.
DR InterPro; IPR008978; HSP20-like_chaperone.
DR Pfam; PF00011; HSP20; 1.
DR SUPFAM; SSF49764; SSF49764; 1.
DR PROSITE; PS01031; SHSP; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cytoplasm; Reference proteome; Stress response.
FT CHAIN 1..164
FT /note="17.8 kDa heat shock protein"
FT /id="PRO_0000387474"
FT DOMAIN 20..154
FT /note="sHSP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00285"
FT REGION 68..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 107..118
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:12869764"
FT /id="VSP_038273"
SQ SEQUENCE 164 AA; 17765 MW; B847EEEB833980D7 CRC64;
MSLVLSRMLL DRFFPGAGGV VAGEARPPMD WRETPVAHVF EMDLPGLAKD QVAVEVVDGH
ILRVRAGGEH EDANNAAKAG KASGEEEEEN DGVRWHCRER AAGRRRAAVT QFRLPEDAAA
DEASARMADG VLTVTVPKRK GKKRHAGNGK AAGDDKPVCC RFWP
