HS17A_ORYSJ
ID HS17A_ORYSJ Reviewed; 161 AA.
AC Q84Q77; A0A0P0VVS7; A0A191ANR7; Q10NK9; Q8W007;
DT 02-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=17.9 kDa class I heat shock protein;
DE AltName: Full=17.9 kDa heat shock protein 1;
DE Short=OsHsp17.9A;
GN Name=HSP17.9A; Synonyms=RNB5 {ECO:0000303|PubMed:19130198};
GN OrderedLocusNames=Os03g0266300, LOC_Os03g15960; ORFNames=OJ1364E02.6;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND SUBCELLULAR LOCATION.
RX PubMed=15659629; DOI=10.1105/tpc.104.028456;
RA Moriguchi K., Suzuki T., Ito Y., Yamazaki Y., Niwa Y., Kurata N.;
RT "Functional isolation of novel nuclear proteins showing a variety of
RT subnuclear localizations.";
RL Plant Cell 17:389-403(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Tainung 67;
RA Huang C.-Y., Lin C.-Y.;
RT "Characterization of a class I LMW HSP gene (the 7th member).";
RL Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Ilpoombyeo; TISSUE=Seed;
RA Yoon U.H., Kim Y.H.;
RT "Molecular cloning of 17.4kDa heat shock protein gene in rice.";
RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Ilpoombyeo; TISSUE=Seed;
RA Yoon U.H., Hahn J.H.;
RT "Structural and expression analysis of germinating seed genes in Oryza
RT sativa L.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [7]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [8]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [9]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [10]
RP INDUCTION.
RX PubMed=15803416; DOI=10.1007/s11103-004-5182-z;
RA Guan J.-C., Jinn T.-L., Yeh C.-H., Feng S.-P., Chen Y.-M., Lin C.-Y.;
RT "Characterization of the genomic structures and selective expression
RT profiles of nine class I small heat shock protein genes clustered on two
RT chromosomes in rice (Oryza sativa L.).";
RL Plant Mol. Biol. 56:795-809(2004).
RN [11]
RP INDUCTION, AND GENE FAMILY.
RX PubMed=19703271; DOI=10.1186/1471-2164-10-393;
RA Sarkar N.K., Kim Y.-K., Grover A.;
RT "Rice sHsp genes: genomic organization and expression profiling under
RT stress and development.";
RL BMC Genomics 10:393-393(2009).
RN [12]
RP INTERACTION WITH RICE STRIPE VIRUS PC4.
RX PubMed=19130198; DOI=10.1007/s11262-008-0324-z;
RA Lu L., Du Z., Qin M., Wang P., Lan H., Niu X., Jia D., Xie L., Lin Q.,
RA Xie L., Wu Z.;
RT "Pc4, a putative movement protein of Rice stripe virus, interacts with a
RT type I DnaJ protein and a small Hsp of rice.";
RL Virus Genes 38:320-327(2009).
CC -!- SUBUNIT: May form oligomeric structures (Probable). Interacts with the
CC rice stripe virus movement protein pc4 (PubMed:19130198).
CC {ECO:0000269|PubMed:19130198, ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15659629}.
CC -!- INDUCTION: By heat shock. {ECO:0000269|PubMed:15803416,
CC ECO:0000269|PubMed:19703271}.
CC -!- SIMILARITY: Belongs to the small heat shock protein (HSP20) family.
CC {ECO:0000255|PROSITE-ProRule:PRU00285}.
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DR EMBL; AB110191; BAC78583.1; -; mRNA.
DR EMBL; AY034057; AAK54445.1; -; Genomic_DNA.
DR EMBL; EU846987; ACJ54891.1; -; mRNA.
DR EMBL; KR905692; ALC78400.1; -; mRNA.
DR EMBL; AC135208; AAP06878.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF95148.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF11571.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS83414.1; -; Genomic_DNA.
DR EMBL; AK073671; BAG93586.1; -; mRNA.
DR EMBL; AK104129; BAG96440.1; -; mRNA.
DR EMBL; AK119239; BAG99597.1; -; mRNA.
DR EMBL; AK119616; BAG99716.1; -; mRNA.
DR RefSeq; XP_015630471.1; XM_015774985.1.
DR AlphaFoldDB; Q84Q77; -.
DR SMR; Q84Q77; -.
DR BioGRID; 801394; 1.
DR STRING; 4530.OS03T0266300-01; -.
DR PaxDb; Q84Q77; -.
DR PRIDE; Q84Q77; -.
DR EnsemblPlants; Os03t0266300-01; Os03t0266300-01; Os03g0266300.
DR EnsemblPlants; Os03t0266300-03; Os03t0266300-03; Os03g0266300.
DR GeneID; 4332357; -.
DR Gramene; Os03t0266300-01; Os03t0266300-01; Os03g0266300.
DR Gramene; Os03t0266300-03; Os03t0266300-03; Os03g0266300.
DR KEGG; osa:4332357; -.
DR eggNOG; KOG0710; Eukaryota.
DR HOGENOM; CLU_046737_5_0_1; -.
DR InParanoid; Q84Q77; -.
DR OMA; NDTWHRT; -.
DR OrthoDB; 1187096at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR Genevisible; Q84Q77; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0043621; F:protein self-association; IBA:GO_Central.
DR GO; GO:0051082; F:unfolded protein binding; IBA:GO_Central.
DR GO; GO:0051259; P:protein complex oligomerization; IBA:GO_Central.
DR GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR GO; GO:0009408; P:response to heat; IEP:UniProtKB.
DR GO; GO:0042542; P:response to hydrogen peroxide; IBA:GO_Central.
DR GO; GO:0009651; P:response to salt stress; IBA:GO_Central.
DR Gene3D; 2.60.40.790; -; 1.
DR InterPro; IPR002068; A-crystallin/Hsp20_dom.
DR InterPro; IPR007052; CS_dom.
DR InterPro; IPR008978; HSP20-like_chaperone.
DR Pfam; PF00011; HSP20; 1.
DR SUPFAM; SSF49764; SSF49764; 1.
DR PROSITE; PS01031; SHSP; 1.
PE 1: Evidence at protein level;
KW Host-virus interaction; Nucleus; Reference proteome; Stress response.
FT CHAIN 1..161
FT /note="17.9 kDa class I heat shock protein"
FT /id="PRO_0000233695"
FT DOMAIN 47..161
FT /note="sHSP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00285"
SQ SEQUENCE 161 AA; 17910 MW; EE8745A9AB59DBD9 CRC64;
MSLIRRSNVF DPFSLDLWDP FDGFPFGSGG SSSGSIFPSF PRGASSETAA FAGARIDWKE
TPEAHVFKAD VPGLKKEEVK VEVDDGNILQ ISGERNKEQE EKTDQWHRVE RSSGKFLRRF
RLPDNAKPEQ IKASMENGVL TVTVPKEEAK KPDVKSIQIS G
