HS17B_ORYSJ
ID HS17B_ORYSJ Reviewed; 166 AA.
AC Q943E9; Q0JQW2;
DT 03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=17.9 kDa heat shock protein 2;
DE Short=OsHsp17.9B;
GN Name=HSP17.9B; OrderedLocusNames=Os01g0135900, LOC_Os01g04350;
GN ORFNames=P0443D08.1;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP INDUCTION.
RX PubMed=15803416; DOI=10.1007/s11103-004-5182-z;
RA Guan J.-C., Jinn T.-L., Yeh C.-H., Feng S.-P., Chen Y.-M., Lin C.-Y.;
RT "Characterization of the genomic structures and selective expression
RT profiles of nine class I small heat shock protein genes clustered on two
RT chromosomes in rice (Oryza sativa L.).";
RL Plant Mol. Biol. 56:795-809(2004).
RN [7]
RP GENE FAMILY.
RX PubMed=19703271; DOI=10.1186/1471-2164-10-393;
RA Sarkar N.K., Kim Y.-K., Grover A.;
RT "Rice sHsp genes: genomic organization and expression profiling under
RT stress and development.";
RL BMC Genomics 10:393-393(2009).
CC -!- SUBUNIT: May form oligomeric structures.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- INDUCTION: Not induced by heat shock. {ECO:0000269|PubMed:15803416}.
CC -!- SIMILARITY: Belongs to the small heat shock protein (HSP20) family.
CC {ECO:0000255|PROSITE-ProRule:PRU00285}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF03866.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP003250; BAB64123.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF03866.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014957; BAS70259.1; -; Genomic_DNA.
DR EMBL; AK065690; BAG89624.1; -; mRNA.
DR EMBL; AK119599; BAG99711.1; -; mRNA.
DR RefSeq; XP_015624472.1; XM_015768986.1.
DR AlphaFoldDB; Q943E9; -.
DR SMR; Q943E9; -.
DR STRING; 4530.OS01T0135900-02; -.
DR PaxDb; Q943E9; -.
DR PRIDE; Q943E9; -.
DR EnsemblPlants; Os01t0135900-02; Os01t0135900-02; Os01g0135900.
DR GeneID; 4325695; -.
DR Gramene; Os01t0135900-02; Os01t0135900-02; Os01g0135900.
DR KEGG; osa:4325695; -.
DR eggNOG; KOG0710; Eukaryota.
DR HOGENOM; CLU_046737_5_0_1; -.
DR InParanoid; Q943E9; -.
DR OMA; THIESRD; -.
DR OrthoDB; 1187096at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR ExpressionAtlas; Q943E9; baseline and differential.
DR Genevisible; Q943E9; OS.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0043621; F:protein self-association; IBA:GO_Central.
DR GO; GO:0051082; F:unfolded protein binding; IBA:GO_Central.
DR GO; GO:0051259; P:protein complex oligomerization; IBA:GO_Central.
DR GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR GO; GO:0042542; P:response to hydrogen peroxide; IBA:GO_Central.
DR GO; GO:0009651; P:response to salt stress; IBA:GO_Central.
DR Gene3D; 2.60.40.790; -; 1.
DR InterPro; IPR002068; A-crystallin/Hsp20_dom.
DR InterPro; IPR008978; HSP20-like_chaperone.
DR Pfam; PF00011; HSP20; 1.
DR SUPFAM; SSF49764; SSF49764; 1.
DR PROSITE; PS01031; SHSP; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Stress response.
FT CHAIN 1..166
FT /note="17.9 kDa heat shock protein 2"
FT /id="PRO_0000387475"
FT DOMAIN 34..152
FT /note="sHSP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00285"
SQ SEQUENCE 166 AA; 17892 MW; D0A13A69488722A7 CRC64;
MSLVKLFDTL AFDAWNPFSI FGTTVAADAW LASDTSAFAN TYIESRETAE AYVFRADLPA
GVKKEEVRVE VDEGNVLVIT GERSVRREEK GQRSHHIERS CATFFGRFHL PDDAVVDLVR
ASMDGGMLTV TVPKVVTDKQ PAIAAAAPVP AVVAPAVEAK AIEASP
