HS181_ORYSJ
ID HS181_ORYSJ Reviewed; 161 AA.
AC Q84Q72; A3AGE0; P93440; Q10NK2; Q40632;
DT 02-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=18.1 kDa class I heat shock protein;
DE AltName: Full=18.1 kDa heat shock protein;
DE Short=OsHsp18.1;
GN Name=HSP18.1; OrderedLocusNames=Os03g0267000, LOC_Os03g16030;
GN ORFNames=OJ1364E02.11, OsJ_10262;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Tainung 67;
RX PubMed=8522180; DOI=10.1016/0378-1119(95)00562-k;
RA Lee Y.-L., Chang P.-F.L., Yeh K.-W., Jinn T.-L., Kung C.-C., Lin W.-C.,
RA Chen Y.-M., Lin C.-Y.;
RT "Cloning and characterization of a cDNA encoding an 18.0-kDa class-I low-
RT molecular-weight heat-shock protein from rice.";
RL Gene 165:223-227(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Tainung 67;
RA Guan J.-C., Chang F.-C., Tseng T.-S., Chang P.-F.L., Yeh K.-W., Chen Y.-M.,
RA Lin C.-Y.;
RT "Structure of Oryza sativa genes encoding three class I low molecular mass
RT heat shock proteins.";
RL (er) Plant Gene Register PGR98-178(1998).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [8]
RP INDUCTION.
RX PubMed=15803416; DOI=10.1007/s11103-004-5182-z;
RA Guan J.-C., Jinn T.-L., Yeh C.-H., Feng S.-P., Chen Y.-M., Lin C.-Y.;
RT "Characterization of the genomic structures and selective expression
RT profiles of nine class I small heat shock protein genes clustered on two
RT chromosomes in rice (Oryza sativa L.).";
RL Plant Mol. Biol. 56:795-809(2004).
RN [9]
RP GENE FAMILY.
RX PubMed=19703271; DOI=10.1186/1471-2164-10-393;
RA Sarkar N.K., Kim Y.-K., Grover A.;
RT "Rice sHsp genes: genomic organization and expression profiling under
RT stress and development.";
RL BMC Genomics 10:393-393(2009).
CC -!- SUBUNIT: May form oligomeric structures.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- INDUCTION: By heat shock, arsenic, azetidine-2-carboxylate, cadmium,
CC copper, ethanol and hydrogen peroxide. {ECO:0000269|PubMed:15803416}.
CC -!- SIMILARITY: Belongs to the small heat shock protein (HSP20) family.
CC {ECO:0000255|PROSITE-ProRule:PRU00285}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA53286.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; X75616; CAA53286.1; ALT_FRAME; mRNA.
DR EMBL; U83670; AAC78393.1; -; Genomic_DNA.
DR EMBL; AC135208; AAP06883.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF95156.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF11575.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS83421.1; -; Genomic_DNA.
DR EMBL; CM000140; EAZ26379.1; -; Genomic_DNA.
DR PIR; JC4377; JC4377.
DR RefSeq; XP_015631116.1; XM_015775630.1.
DR AlphaFoldDB; Q84Q72; -.
DR SMR; Q84Q72; -.
DR STRING; 4530.OS03T0267000-00; -.
DR PaxDb; Q84Q72; -.
DR PRIDE; Q84Q72; -.
DR EnsemblPlants; Os03t0267000-00; Os03t0267000-00; Os03g0267000.
DR GeneID; 4332361; -.
DR Gramene; Os03t0267000-00; Os03t0267000-00; Os03g0267000.
DR KEGG; osa:4332361; -.
DR eggNOG; KOG0710; Eukaryota.
DR HOGENOM; CLU_046737_5_0_1; -.
DR InParanoid; Q84Q72; -.
DR OMA; QMERMFD; -.
DR OrthoDB; 1187096at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000007752; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR ExpressionAtlas; Q84Q72; baseline and differential.
DR Genevisible; Q84Q72; OS.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0043621; F:protein self-association; IBA:GO_Central.
DR GO; GO:0051082; F:unfolded protein binding; IBA:GO_Central.
DR GO; GO:0051259; P:protein complex oligomerization; IBA:GO_Central.
DR GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR GO; GO:0046685; P:response to arsenic-containing substance; IEP:UniProtKB.
DR GO; GO:0046686; P:response to cadmium ion; IEP:UniProtKB.
DR GO; GO:0046688; P:response to copper ion; IEP:UniProtKB.
DR GO; GO:0045471; P:response to ethanol; IEP:UniProtKB.
DR GO; GO:0009408; P:response to heat; IEP:UniProtKB.
DR GO; GO:0042542; P:response to hydrogen peroxide; IEP:UniProtKB.
DR GO; GO:0009651; P:response to salt stress; IBA:GO_Central.
DR Gene3D; 2.60.40.790; -; 1.
DR InterPro; IPR002068; A-crystallin/Hsp20_dom.
DR InterPro; IPR007052; CS_dom.
DR InterPro; IPR008978; HSP20-like_chaperone.
DR Pfam; PF00011; HSP20; 1.
DR SUPFAM; SSF49764; SSF49764; 1.
DR PROSITE; PS01031; SHSP; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Stress response.
FT CHAIN 1..161
FT /note="18.1 kDa class I heat shock protein"
FT /id="PRO_0000233696"
FT DOMAIN 47..161
FT /note="sHSP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00285"
FT CONFLICT 35
FT /note="S -> T (in Ref. 1; CAA53286 and 2; AAC78393)"
FT /evidence="ECO:0000305"
FT CONFLICT 64
FT /note="Missing (in Ref. 1; CAA53286 and 2; AAC78393)"
FT /evidence="ECO:0000305"
FT CONFLICT 111
FT /note="R -> A (in Ref. 1; CAA53286)"
FT /evidence="ECO:0000305"
FT CONFLICT 116
FT /note="F -> Y (in Ref. 1; EAZ26379)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 161 AA; 18082 MW; 011EF2F19E6F7D36 CRC64;
MSLIRRSNVF DPFSLDLWDP FDGFPFGSGS RSSGSIFPSF PRGTSSETAA FAGARIDWKE
TPEAHVFKAD VPGLKKEEVK VEVEDGNVLQ ISGERSKEQE EKTDKWHRVE RSSGKFLRRF
RLPENTKPEQ IKASMENGVL TVTVPKEEPK KPDVKSIQVT G
