HS188_ORYSJ
ID HS188_ORYSJ Reviewed; 173 AA.
AC Q7EZ57; A0A0P0X6R9; Q7EZ56;
DT 03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=18.8 kDa class V heat shock protein;
DE AltName: Full=18.8 kDa heat shock protein;
DE Short=OsHsp18.8;
GN Name=HSP18.8; OrderedLocusNames=Os07g0517100, LOC_Os07g33350;
GN ORFNames=OsJ_24457, OSJNBa0036M16.111-1, OSJNBa0036M16.111-2,
GN P0650C03.26-1, P0650C03.26-2;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP INDUCTION, AND GENE FAMILY.
RX PubMed=19703271; DOI=10.1186/1471-2164-10-393;
RA Sarkar N.K., Kim Y.-K., Grover A.;
RT "Rice sHsp genes: genomic organization and expression profiling under
RT stress and development.";
RL BMC Genomics 10:393-393(2009).
CC -!- SUBUNIT: May form oligomeric structures.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- INDUCTION: Not induced by heat shock. {ECO:0000269|PubMed:19703271}.
CC -!- SIMILARITY: Belongs to the small heat shock protein (HSP20) family.
CC {ECO:0000255|PROSITE-ProRule:PRU00285}.
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DR EMBL; AP005103; BAC83716.1; -; Genomic_DNA.
DR EMBL; AP005103; BAC83717.1; -; Genomic_DNA.
DR EMBL; AP005320; BAD31319.1; -; Genomic_DNA.
DR EMBL; AP005320; BAD31320.1; -; Genomic_DNA.
DR EMBL; AP008213; BAF21702.2; -; Genomic_DNA.
DR EMBL; AP014963; BAT01774.1; -; Genomic_DNA.
DR EMBL; CM000144; EEE67274.1; -; Genomic_DNA.
DR EMBL; AK099296; BAG94048.1; -; mRNA.
DR RefSeq; XP_015645510.1; XM_015790024.1.
DR AlphaFoldDB; Q7EZ57; -.
DR SMR; Q7EZ57; -.
DR STRING; 4530.OS07T0517100-01; -.
DR PaxDb; Q7EZ57; -.
DR PRIDE; Q7EZ57; -.
DR EnsemblPlants; Os07t0517100-01; Os07t0517100-01; Os07g0517100.
DR EnsemblPlants; Os07t0517100-02; Os07t0517100-02; Os07g0517100.
DR GeneID; 4343386; -.
DR Gramene; Os07t0517100-01; Os07t0517100-01; Os07g0517100.
DR Gramene; Os07t0517100-02; Os07t0517100-02; Os07g0517100.
DR KEGG; osa:4343386; -.
DR eggNOG; KOG0710; Eukaryota.
DR HOGENOM; CLU_046737_13_0_1; -.
DR InParanoid; Q7EZ57; -.
DR OMA; WQWQWRL; -.
DR OrthoDB; 1187096at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000007752; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR ExpressionAtlas; Q7EZ57; baseline and differential.
DR Genevisible; Q7EZ57; OS.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0043621; F:protein self-association; IBA:GO_Central.
DR GO; GO:0051082; F:unfolded protein binding; IBA:GO_Central.
DR GO; GO:0051259; P:protein complex oligomerization; IBA:GO_Central.
DR GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR GO; GO:0009408; P:response to heat; IEP:UniProtKB.
DR GO; GO:0042542; P:response to hydrogen peroxide; IBA:GO_Central.
DR GO; GO:0009651; P:response to salt stress; IBA:GO_Central.
DR Gene3D; 2.60.40.790; -; 1.
DR InterPro; IPR002068; A-crystallin/Hsp20_dom.
DR InterPro; IPR008978; HSP20-like_chaperone.
DR Pfam; PF00011; HSP20; 1.
DR SUPFAM; SSF49764; SSF49764; 1.
DR PROSITE; PS01031; SHSP; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Stress response.
FT CHAIN 1..173
FT /note="18.8 kDa class V heat shock protein"
FT /id="PRO_0000387470"
FT DOMAIN 48..157
FT /note="sHSP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00285"
SQ SEQUENCE 173 AA; 18814 MW; 60DC886AF7830DAB CRC64;
MDYYYPMEEE EEVHERPRFR RPVHPWQWHH WQNLLGLLSS SSPSPATAAA AQRCSHVSWE
ETAAAHLYSA SLPGVRKEEI RVEVEDAMYL VIRTELDDGG DGDGGGGGGR RSFARKFRLP
AMVDADGISA EYTHGVLRVT VPRLHTRARP VVNLAGGGGG GGGPACDPVA RAA