ID   40C1_ORYSJ              Reviewed;         348 AA.
AC   Q10M12; Q40705; Q8H7M3;
DT   30-NOV-2016, integrated into UniProtKB/Swiss-Prot.
DT   22-AUG-2006, sequence version 1.
DT   03-AUG-2022, entry version 108.
DE   RecName: Full=Ricin B-like lectin R40C1 {ECO:0000305};
DE   AltName: Full=Osr40c1 {ECO:0000303|PubMed:9265787};
GN   Name=R40C1 {ECO:0000305};
GN   OrderedLocusNames=Os03g0327600 {ECO:0000312|EMBL:BAF11909.1},
GN   LOC_Os03g21040 {ECO:0000312|EMBL:ABF95725.1};
GN   ORFNames=OSJNBb0014I10.3 {ECO:0000312|EMBL:AAN64997.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], IDENTIFICATION BY MASS SPECTROMETRY, TISSUE
RP   SPECIFICITY, AND INDUCTION.
RC   TISSUE=Root;
RX   PubMed=9265787; DOI=10.1007/s004250050148;
RA   Moons A., Gielen J., Vandekerckhove J., Van der Straeten D., Gheysen G.,
RA   Van Montagu M.;
RT   "An abscisic-acid- and salt-stress-responsive rice cDNA from a novel plant
RT   gene family.";
RL   Planta 202:443-454(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16109971; DOI=10.1101/gr.3869505;
RG   The rice chromosome 3 sequencing consortium;
RA   Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA   Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA   Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA   Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA   Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA   Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA   Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA   Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA   Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA   Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA   O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA   Jin W., Lee H.R., Jiang J., Jackson S.;
RT   "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT   and diverged grass species.";
RL   Genome Res. 15:1284-1291(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [5]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Lectin which binds carbohydrates in vitro. Interacts through
CC       its lectin domain with glycan structures containing specific motifs.
CC       {ECO:0000250|UniProtKB:Q945P1}.
CC   -!- TISSUE SPECIFICITY: Expressed in roots and shoots.
CC       {ECO:0000269|PubMed:9265787}.
CC   -!- INDUCTION: Induced by abscisic acid (ABA) and salt stress in roots.
CC       {ECO:0000269|PubMed:9265787}.
CC   -!- DOMAIN: The ricin B-type lectin domain binds glycan structures.
CC       {ECO:0000250|UniProtKB:Q945P1}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAN64997.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; X95402; CAA64683.1; -; mRNA.
DR   EMBL; AC126222; AAN64997.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; DP000009; ABF95725.1; -; Genomic_DNA.
DR   EMBL; AP008209; BAF11909.1; -; Genomic_DNA.
DR   EMBL; AP014959; BAS84002.1; -; Genomic_DNA.
DR   EMBL; AK069815; BAG91621.1; -; mRNA.
DR   PIR; T03911; T03911.
DR   RefSeq; XP_015631880.1; XM_015776394.1.
DR   AlphaFoldDB; Q10M12; -.
DR   SMR; Q10M12; -.
DR   STRING; 4530.OS03T0327600-01; -.
DR   CarbonylDB; Q10M12; -.
DR   PaxDb; Q10M12; -.
DR   PRIDE; Q10M12; -.
DR   EnsemblPlants; Os03t0327600-01; Os03t0327600-01; Os03g0327600.
DR   GeneID; 4332715; -.
DR   Gramene; Os03t0327600-01; Os03t0327600-01; Os03g0327600.
DR   KEGG; osa:4332715; -.
DR   eggNOG; ENOG502QTCR; Eukaryota.
DR   HOGENOM; CLU_039568_0_0_1; -.
DR   InParanoid; Q10M12; -.
DR   OMA; NYEGAPY; -.
DR   OrthoDB; 1430900at2759; -.
DR   Proteomes; UP000000763; Chromosome 3.
DR   Proteomes; UP000059680; Chromosome 3.
DR   GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR   InterPro; IPR040249; Ricin_B-like_lectin_EULS3-like.
DR   InterPro; IPR035992; Ricin_B-like_lectins.
DR   PANTHER; PTHR31257; PTHR31257; 2.
DR   SUPFAM; SSF50370; SSF50370; 2.
PE   1: Evidence at protein level;
KW   Lectin; Reference proteome.
FT   CHAIN           1..348
FT                   /note="Ricin B-like lectin R40C1"
FT                   /id="PRO_0000438377"
FT   DOMAIN          199..345
FT                   /note="Ricin B-type lectin"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00174"
FT   REGION          1..26
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   348 AA;  38822 MW;  73585630E8C9E1AD CRC64;
     MFGFGHHGHH GQDQPPQHHG GGGGGAHQPT FKIFCRADEG YCVAVREGNV VLAPTNPRDE
     HQHWYKDMRF SAKIKDEEGN PAFALVNKAT GLAIKHSLGQ GHPVKLAPFN PEYPDESVLW
     TESGDVGKSF RCIRMLNNIR LNFDAFHGDK DHGGVHDGTT IVLWEWAKGD NQCWKILPWG
     DEAYAGGSAN APRGGNEPTV RIFCKADEGF SVTVRGGSVC LAPTNPRDEY QHWIKDMRHS
     NSIKDEEGYP AFALVNRVTG EAIKHSQGEG HPVKLVPYNP GYQDESVLWT ESRDVGHGFR
     CIRMVNNIYL NFDALHGDKD HGGVRDGTTV ALWKWCEGDN QRWKIVPW