HVM40_MOUSE
ID HVM40_MOUSE Reviewed; 119 AA.
AC P01810;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 21-JUL-1986, sequence version 1.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=Ig heavy chain V region J539;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP PRELIMINARY PROTEIN SEQUENCE.
RX PubMed=111245; DOI=10.1073/pnas.76.6.2890;
RA Rao D.N., Rudikoff S., Krutzsch H., Potter M.;
RT "Structural evidence for independent joining region gene in immunoglobulin
RT heavy chains from anti-galactan myeloma proteins and its potential role in
RT generating diversity in complementarity-determining regions.";
RL Proc. Natl. Acad. Sci. U.S.A. 76:2890-2894(1979).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS).
RX PubMed=3449853; DOI=10.1002/prot.340010112;
RA Suh S.W., Bhat T.N., Navia M.A., Cohen G.H., Rao D.N., Rudikoff S.,
RA Davies D.R.;
RT "The galactan-binding immunoglobulin Fab J539: an X-ray diffraction study
RT at 2.6-A resolution.";
RL Proteins 1:74-80(1986).
CC -!- MISCELLANEOUS: This chain was isolated from a myeloma protein that
CC binds galactan.
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DR PIR; A02080; AVMSJ5.
DR PDB; 2FBJ; X-ray; 1.95 A; H=1-119.
DR PDBsum; 2FBJ; -.
DR AlphaFoldDB; P01810; -.
DR SMR; P01810; -.
DR GlyGen; P01810; 1 site.
DR MaxQB; P01810; -.
DR PRIDE; P01810; -.
DR EvolutionaryTrace; P01810; -.
DR Proteomes; UP000000589; Unplaced.
DR RNAct; P01810; protein.
DR GO; GO:0009897; C:external side of plasma membrane; IBA:GO_Central.
DR GO; GO:0042571; C:immunoglobulin complex, circulating; IBA:GO_Central.
DR GO; GO:0003823; F:antigen binding; IBA:GO_Central.
DR GO; GO:0034987; F:immunoglobulin receptor binding; IBA:GO_Central.
DR GO; GO:0050853; P:B cell receptor signaling pathway; IBA:GO_Central.
DR GO; GO:0006958; P:complement activation, classical pathway; IBA:GO_Central.
DR GO; GO:0042742; P:defense response to bacterium; IBA:GO_Central.
DR GO; GO:0045087; P:innate immune response; IBA:GO_Central.
DR GO; GO:0006911; P:phagocytosis, engulfment; IBA:GO_Central.
DR GO; GO:0006910; P:phagocytosis, recognition; IBA:GO_Central.
DR GO; GO:0050871; P:positive regulation of B cell activation; IBA:GO_Central.
DR Gene3D; 2.60.40.10; -; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR013106; Ig_V-set.
DR Pfam; PF07686; V-set; 1.
DR SMART; SM00409; IG; 1.
DR SMART; SM00406; IGv; 1.
DR SUPFAM; SSF48726; SSF48726; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Adaptive immunity; Direct protein sequencing; Immunity;
KW Immunoglobulin; Reference proteome.
FT CHAIN 1..>119
FT /note="Ig heavy chain V region J539"
FT /id="PRO_0000059893"
FT NON_TER 119
FT STRAND 3..7
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 10..12
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 18..27
FT /evidence="ECO:0007829|PDB:2FBJ"
FT HELIX 29..31
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 34..39
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 45..51
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 58..60
FT /evidence="ECO:0007829|PDB:2FBJ"
FT TURN 62..67
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 68..72
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 74..76
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 78..83
FT /evidence="ECO:0007829|PDB:2FBJ"
FT HELIX 88..90
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 92..100
FT /evidence="ECO:0007829|PDB:2FBJ"
FT TURN 101..103
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 104..108
FT /evidence="ECO:0007829|PDB:2FBJ"
FT STRAND 112..116
FT /evidence="ECO:0007829|PDB:2FBJ"
SQ SEQUENCE 119 AA; 13240 MW; 577B4F1DB675C1F1 CRC64;
EVKLLESGGG LVQPGGSLKL SCAASGFDFS KYWMSWVRQA PGKGLEWIGE IHPDSGTINY
TPSLKDKFII SRDNAKNSLY LQMSKVRSED TALYYCARLH YYGYNAYWGQ GTLVTVSAE