HVRB_RHOCB
ID HVRB_RHOCB Reviewed; 292 AA.
AC P42507; D5AKH0;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=AhcY transcriptional activator HvrB;
GN Name=hvrB; OrderedLocusNames=RCAP_rcc00047;
OS Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Rhodobacter.
OX NCBI_TaxID=272942;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=8282711; DOI=10.1128/jb.176.1.61-69.1994;
RA Buggy J.J., Sganga M.W., Bauer C.E.;
RT "Nucleotide sequence and characterization of the Rhodobacter capsulatus
RT hvrB gene: HvrB is an activator of S-adenosyl-L-homocysteine hydrolase
RT expression and is a member of the LysR family.";
RL J. Bacteriol. 176:61-69(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-309 / NBRC 16581 / SB1003;
RX PubMed=20418398; DOI=10.1128/jb.00366-10;
RA Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V.,
RA Haselkorn R.;
RT "Complete genome sequence of the photosynthetic purple nonsulfur bacterium
RT Rhodobacter capsulatus SB 1003.";
RL J. Bacteriol. 192:3545-3546(2010).
CC -!- FUNCTION: Functions as a low-light activator of ahcY expression (gene
CC for S-adenosyl-L-homocysteine hydrolase) and as a high-light activator
CC of an uncharacterized 21.6 kDa protein in the ahcY-hvrB intergenic
CC region (orf5). It is also a negative regulator of its own expression.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000305}.
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DR EMBL; L23836; AAA53542.1; -; Genomic_DNA.
DR EMBL; CP001312; ADE83812.1; -; Genomic_DNA.
DR PIR; C36863; C36863.
DR AlphaFoldDB; P42507; -.
DR SMR; P42507; -.
DR STRING; 272942.RCAP_rcc00047; -.
DR EnsemblBacteria; ADE83812; ADE83812; RCAP_rcc00047.
DR KEGG; rcp:RCAP_rcc00047; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_37_1_5; -.
DR OMA; FAVWWLM; -.
DR Proteomes; UP000002361; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Activator; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..292
FT /note="AhcY transcriptional activator HvrB"
FT /id="PRO_0000105639"
FT DOMAIN 10..67
FT /note="HTH lysR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00253"
FT DNA_BIND 27..46
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00253"
SQ SEQUENCE 292 AA; 32174 MW; 782CCC27EE101A6A CRC64;
MSEIDWRKMP PLTALRAFAA TASEGGFSAA ARKLNVTHAA IAQQVRALEA DLDVPLVWRD
GKHLHLTPEG ERFAKALADG FSMIQSAADM LRADTSEKAL TVTVPPVFAS EWLMPRLARF
WKKHPDIPLS LLPDARLVDL KEIGANIGIR FGVGKWPGVI SVFLTAAPQV VVAAPELLGG
RKKLSLREMA MLPWVREGDW PEQMQLLESM GLVPAALKFV DFPNEELALA AAREGIGLHL
ETEALIVEDL KLGWLVKIHE LTEESLGYYI VRPPGRLNPA AKIFIDWLKA EA