HXD13_CHICK
ID HXD13_CHICK Reviewed; 301 AA.
AC P24344; Q90781;
DT 01-MAR-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 3.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Homeobox protein Hox-D13;
DE AltName: Full=Homeobox protein Hox-4.8;
DE Short=Chox-4.8;
DE AltName: Full=Homeobox protein Hox-4G;
DE Short=Chox-4G;
GN Name=HOXD13; Synonyms=CHOX-4.8;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=8096637; DOI=10.1093/nar/21.5.1316;
RA Rogina B., Upholt W.B.;
RT "Cloning of full coding chicken cDNAs for the homeobox-containing gene
RT Hoxd-13.";
RL Nucleic Acids Res. 21:1316-1316(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE OF 208-301.
RA Nohno T.;
RL Submitted (FEB-1992) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 234-301, AND FUNCTION.
RX PubMed=1672266; DOI=10.1016/0092-8674(91)90274-3;
RA Nohno T., Noji S., Koyama E., Ohyama K., Myokai F., Kuroiwa A., Saito T.,
RA Taniguchi S.;
RT "Involvement of the Chox-4 chicken homeobox genes in determination of
RT anteroposterior axial polarity during limb development.";
RL Cell 64:1197-1205(1991).
RN [4]
RP NUCLEOTIDE SEQUENCE OF 234-293.
RX PubMed=1673231; DOI=10.1038/350585a0;
RA Izpisua-Belmonte J.-C., Tickle C., Dolle P., Wolpert L., Duboule D.;
RT "Expression of the homeobox Hox-4 genes and the specification of position
RT in chick wing development.";
RL Nature 350:585-589(1991).
CC -!- FUNCTION: Sequence-specific transcription factor that binds gene
CC promoters and activates their transcription (By similarity). Part of a
CC developmental regulatory system that provides cells with specific
CC positional identities on the anterior-posterior axis (PubMed:1672266).
CC {ECO:0000250|UniProtKB:P70217, ECO:0000269|PubMed:1672266}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P70217}.
CC -!- DEVELOPMENTAL STAGE: Coordinately expressed in partially overlapping
CC domains during wing development.
CC -!- SIMILARITY: Belongs to the Abd-B homeobox family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; L09550; AAA48824.1; -; mRNA.
DR EMBL; D10290; BAA01135.1; -; Genomic_DNA.
DR PIR; S35526; S35526.
DR RefSeq; NP_990765.1; NM_205434.1.
DR AlphaFoldDB; P24344; -.
DR SMR; P24344; -.
DR STRING; 9031.ENSGALP00000015076; -.
DR PaxDb; P24344; -.
DR GeneID; 396415; -.
DR KEGG; gga:396415; -.
DR CTD; 3239; -.
DR VEuPathDB; HostDB:geneid_396415; -.
DR eggNOG; KOG0487; Eukaryota.
DR InParanoid; P24344; -.
DR OrthoDB; 1190384at2759; -.
DR PhylomeDB; P24344; -.
DR PRO; PR:P24344; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; ISS:UniProtKB.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:UniProtKB.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISS:UniProtKB.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR022067; HoxA13_N.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF12284; HoxA13_N; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; DNA-binding; Homeobox; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..301
FT /note="Homeobox protein Hox-D13"
FT /id="PRO_0000200246"
FT DNA_BIND 234..293
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 55..75
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 208..218
FT /note="QSSHFWKSSFP -> NSNFSRRVFSL (in Ref. 2)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 301 AA; 32373 MW; E598FD4E14AA6BCA CRC64;
MDGLRGDSSG GGGGGGTPGQ CRNFLSSPVF GAAHTGRAAA AAAAAASGFA YAGGGERSGA
AARPDPPAKD CPGSGAPPAA PALGYGYHFG NGYYSCRMSN GVGIQQNALK SPPHASIGGF
PVEKYMDVSS LTSTSVPANE VSTRAKEVSS YQGYTNPYQH VPGYIDMVST FGSGEPRHET
YISMEGYQSW TLANGWNGQV YCAKDQTQSS HFWKSSFPGD VALNQPEMCV YRRGRKKRVP
YTKLQLKELE NEYAINKFIN KDKRRRISAA TNLSERQVTI WFQNRRVKDK KIVSKLKDNV
S