IAA13_ORYSI
ID IAA13_ORYSI Reviewed; 236 AA.
AC A2XLV9; Q75KX2; Q75KX3; Q7Y1Y5; Q8VWE7;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 20-MAR-2007, sequence version 1.
DT 25-MAY-2022, entry version 66.
DE RecName: Full=Auxin-responsive protein IAA13;
DE AltName: Full=Indoleacetic acid-induced protein 13;
GN Name=IAA13; Synonyms=IAA1; ORFNames=OsI_013052;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], INDUCTION, AND TISSUE SPECIFICITY.
RC STRAIN=cv. Pusa Basmati; TISSUE=Root;
RX PubMed=11759839; DOI=10.1093/dnares/8.5.193;
RA Thakur J.K., Tyagi A.K., Khurana J.P.;
RT "OsIAA1, an Aux/IAA cDNA from rice, and changes in its expression as
RT influenced by auxin and light.";
RL DNA Res. 8:193-203(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], SUBCELLULAR LOCATION, AND INDUCTION.
RX PubMed=16139905; DOI=10.1016/j.bbaexp.2005.08.002;
RA Thakur J.K., Jain M., Tyagi A.K., Khurana J.P.;
RT "Exogenous auxin enhances the degradation of a light down-regulated and
RT nuclear-localized OsiIAA1, an Aux/IAA protein from rice, via proteasome.";
RL Biochim. Biophys. Acta 1730:196-205(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [4]
RP TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX PubMed=16200395; DOI=10.1007/s10142-005-0005-0;
RA Jain M., Kaur N., Garg R., Thakur J.K., Tyagi A.K., Khurana J.P.;
RT "Structure and expression analysis of early auxin-responsive Aux/IAA gene
RT family in rice (Oryza sativa).";
RL Funct. Integr. Genomics 6:47-59(2006).
CC -!- FUNCTION: Aux/IAA proteins are short-lived transcriptional factors that
CC function as repressors of early auxin response genes at low auxin
CC concentrations. {ECO:0000250}.
CC -!- SUBUNIT: Homodimers and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16139905}.
CC -!- TISSUE SPECIFICITY: Highly expressed in etiolated seedlings. Expressed
CC in roots and flowers. {ECO:0000269|PubMed:11759839,
CC ECO:0000269|PubMed:16200395}.
CC -!- INDUCTION: By auxin. Down-regulated by auxin depletion, and light in
CC dark-grown seedlings. {ECO:0000269|PubMed:11759839,
CC ECO:0000269|PubMed:16139905, ECO:0000269|PubMed:16200395}.
CC -!- SIMILARITY: Belongs to the Aux/IAA family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AJ251791; CAC80823.1; -; mRNA.
DR EMBL; AJ563599; CAD91549.1; -; Genomic_DNA.
DR EMBL; CM000128; EAY91819.1; -; Genomic_DNA.
DR AlphaFoldDB; A2XLV9; -.
DR SMR; A2XLV9; -.
DR STRING; 39946.A2XLV9; -.
DR EnsemblPlants; BGIOSGA009837-TA; BGIOSGA009837-PA; BGIOSGA009837.
DR Gramene; BGIOSGA009837-TA; BGIOSGA009837-PA; BGIOSGA009837.
DR HOGENOM; CLU_049393_1_5_1; -.
DR OMA; SYRRNIM; -.
DR Proteomes; UP000007015; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR033389; AUX/IAA_dom.
DR InterPro; IPR003311; AUX_IAA.
DR InterPro; IPR000270; PB1_dom.
DR PANTHER; PTHR31734; PTHR31734; 2.
DR Pfam; PF02309; AUX_IAA; 1.
DR PROSITE; PS51745; PB1; 1.
PE 2: Evidence at transcript level;
KW Auxin signaling pathway; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation.
FT CHAIN 1..236
FT /note="Auxin-responsive protein IAA13"
FT /id="PRO_0000291398"
FT DOMAIN 131..218
FT /note="PB1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01081"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 52..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 105..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 12..16
FT /note="EAR-like (transcriptional repression)"
FT /evidence="ECO:0000250"
FT CONFLICT 185
FT /note="V -> G (in Ref. 1; CAC80823)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 236 AA; 25102 MW; 58335EDDBE4818AE CRC64;
MAGADVDVGT ELRLGLPGGG GGAAEAAAKA AKRGFEETID LKLKLPTAGM EEAAAGKAEA
PAAEKAKRPA EAAAADAEKP PAPKAQAVGW PPVRSFRRNI MTVQSVKSKK EEEADKQQQQ
PAANASGSNS SAFVKVSMDG APYLRKVDLK MYNSYKDLSL ALQKMFGTFT ATGNNMNEVN
GSDAVTTYED KDGDWMLVGD VPWQMFVESC KRLRIMKGSE AIGLAPRAKD KYKNKS
