IAA15_ORYSJ
ID IAA15_ORYSJ Reviewed; 212 AA.
AC Q6AT10; Q0DKA9;
DT 07-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Auxin-responsive protein IAA15;
DE AltName: Full=Indoleacetic acid-induced protein 15;
GN Name=IAA15; OrderedLocusNames=Os05g0178600, LOC_Os05g08570;
GN ORFNames=OSJNBa0029B02.19;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX PubMed=16200395; DOI=10.1007/s10142-005-0005-0;
RA Jain M., Kaur N., Garg R., Thakur J.K., Tyagi A.K., Khurana J.P.;
RT "Structure and expression analysis of early auxin-responsive Aux/IAA gene
RT family in rice (Oryza sativa).";
RL Funct. Integr. Genomics 6:47-59(2006).
CC -!- FUNCTION: Aux/IAA proteins are short-lived transcriptional factors that
CC function as repressors of early auxin response genes at low auxin
CC concentrations. {ECO:0000250}.
CC -!- SUBUNIT: Homodimers and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Highly expressed in flowers. Expressed at low
CC levels in roots and seedlings. {ECO:0000269|PubMed:16200395}.
CC -!- INDUCTION: By auxin. {ECO:0000269|PubMed:16200395}.
CC -!- SIMILARITY: Belongs to the Aux/IAA family. {ECO:0000305}.
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DR EMBL; AC144738; AAT77358.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF16714.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS92538.1; -; Genomic_DNA.
DR EMBL; AK061796; BAG88117.1; -; mRNA.
DR EMBL; AK100080; BAG94434.1; -; mRNA.
DR RefSeq; XP_015640747.1; XM_015785261.1.
DR AlphaFoldDB; Q6AT10; -.
DR SMR; Q6AT10; -.
DR STRING; 4530.OS05T0178600-01; -.
DR PaxDb; Q6AT10; -.
DR PRIDE; Q6AT10; -.
DR EnsemblPlants; Os05t0178600-01; Os05t0178600-01; Os05g0178600.
DR GeneID; 4337971; -.
DR Gramene; Os05t0178600-01; Os05t0178600-01; Os05g0178600.
DR KEGG; osa:4337971; -.
DR eggNOG; ENOG502RYMU; Eukaryota.
DR HOGENOM; CLU_049393_1_4_1; -.
DR InParanoid; Q6AT10; -.
DR OMA; CAIFHTC; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q6AT10; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0009733; P:response to auxin; IC:Gramene.
DR InterPro; IPR033389; AUX/IAA_dom.
DR InterPro; IPR003311; AUX_IAA.
DR InterPro; IPR000270; PB1_dom.
DR PANTHER; PTHR31734; PTHR31734; 1.
DR Pfam; PF02309; AUX_IAA; 1.
DR PROSITE; PS51745; PB1; 1.
PE 2: Evidence at transcript level;
KW Auxin signaling pathway; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation.
FT CHAIN 1..212
FT /note="Auxin-responsive protein IAA15"
FT /id="PRO_0000223214"
FT DOMAIN 107..201
FT /note="PB1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01081"
FT REGION 1..84
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 25..29
FT /note="EAR-like (transcriptional repression)"
FT /evidence="ECO:0000250"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 27..52
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 212 AA; 22881 MW; B5BDF2633A602269 CRC64;
MSVETERSST ESSAASGLDF EDTALTLRLP GSSSSSSSSS SSSSSSSPSE PDRKRASATD
DDPDNRLGST ATESPPSPKA RVVGWPPVRA FRKNALAALA AASSSKAKFV KVAVDGAPYL
RKVDLEAYRG YDQLLAALQD KFFSHFTIRK LGNEEMKLVD AVSGNEYVPT YEDKDGDWML
VGDVPWKMFV ETCQRLRLMK SSEAVNLAPR SA
