IAA24_ORYSJ
ID IAA24_ORYSJ Reviewed; 219 AA.
AC Q6ZL57; Q0D858;
DT 07-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Auxin-responsive protein IAA24;
DE AltName: Full=Indoleacetic acid-induced protein 24;
GN Name=IAA24; OrderedLocusNames=Os07g0182400, LOC_Os07g08460;
GN ORFNames=OJ1506_G02.8;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [5]
RP TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX PubMed=16200395; DOI=10.1007/s10142-005-0005-0;
RA Jain M., Kaur N., Garg R., Thakur J.K., Tyagi A.K., Khurana J.P.;
RT "Structure and expression analysis of early auxin-responsive Aux/IAA gene
RT family in rice (Oryza sativa).";
RL Funct. Integr. Genomics 6:47-59(2006).
CC -!- FUNCTION: Aux/IAA proteins are short-lived transcriptional factors that
CC function as repressors of early auxin response genes at low auxin
CC concentrations. {ECO:0000250}.
CC -!- SUBUNIT: Homodimers and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Highly expressed in flowers. Expressed in
CC seedlings. {ECO:0000269|PubMed:16200395}.
CC -!- INDUCTION: By auxin. {ECO:0000269|PubMed:16200395}.
CC -!- SIMILARITY: Belongs to the Aux/IAA family. {ECO:0000305}.
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DR EMBL; AP003835; BAC83117.1; -; Genomic_DNA.
DR EMBL; AP008213; BAF20965.1; -; Genomic_DNA.
DR EMBL; AP014963; BAT00332.1; -; Genomic_DNA.
DR EMBL; AK103483; BAG96104.1; -; mRNA.
DR RefSeq; XP_015645192.1; XM_015789706.1.
DR AlphaFoldDB; Q6ZL57; -.
DR SMR; Q6ZL57; -.
DR STRING; 4530.OS07T0182400-01; -.
DR PaxDb; Q6ZL57; -.
DR PRIDE; Q6ZL57; -.
DR EnsemblPlants; Os07t0182400-01; Os07t0182400-01; Os07g0182400.
DR GeneID; 4342573; -.
DR Gramene; Os07t0182400-01; Os07t0182400-01; Os07g0182400.
DR KEGG; osa:4342573; -.
DR eggNOG; ENOG502QU81; Eukaryota.
DR HOGENOM; CLU_049393_0_0_1; -.
DR InParanoid; Q6ZL57; -.
DR OMA; QHAIAYE; -.
DR OrthoDB; 1265494at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR Genevisible; Q6ZL57; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0009733; P:response to auxin; ISS:Gramene.
DR InterPro; IPR033389; AUX/IAA_dom.
DR InterPro; IPR003311; AUX_IAA.
DR InterPro; IPR000270; PB1_dom.
DR PANTHER; PTHR31734; PTHR31734; 1.
DR Pfam; PF02309; AUX_IAA; 1.
DR PROSITE; PS51745; PB1; 1.
PE 2: Evidence at transcript level;
KW Auxin signaling pathway; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation.
FT CHAIN 1..219
FT /note="Auxin-responsive protein IAA24"
FT /id="PRO_0000223223"
FT DOMAIN 129..215
FT /note="PB1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01081"
FT REGION 24..88
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 109..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 24..28
FT /note="EAR-like (transcriptional repression)"
FT /evidence="ECO:0000250"
FT COMPBIAS 30..45
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 219 AA; 23047 MW; AAB1ABE89C6362ED CRC64;
MASSSSLRST SCLASAAETD ADNLCLRLGP PGSSITTTTT TGGADPAAKR SLGAKRSLES
TDSMASGTGT SAAGDEHDDD TAAPAKAQVV GWPPVRAYRR NTFHQAAAAA AATKKGGDEK
QKQQQQGGGL YVKVSMDGAP YLRKVDLKMC KGYRELREAL DLLFTKCFSA TASDGCSDGQ
FAIAYEDKDG DLMLVGDVPW EMFISSCKKL RIMKGSEAR
