IAA30_ORYSJ
ID IAA30_ORYSJ Reviewed; 277 AA.
AC P0C132; A0A0P0YC95; Q2QMK1;
DT 07-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 07-FEB-2006, sequence version 1.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Auxin-responsive protein IAA30;
DE AltName: Full=Indoleacetic acid-induced protein 30;
GN Name=IAA30; OrderedLocusNames=Os12g0601300, LOC_Os12g40890;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX PubMed=16200395; DOI=10.1007/s10142-005-0005-0;
RA Jain M., Kaur N., Garg R., Thakur J.K., Tyagi A.K., Khurana J.P.;
RT "Structure and expression analysis of early auxin-responsive Aux/IAA gene
RT family in rice (Oryza sativa).";
RL Funct. Integr. Genomics 6:47-59(2006).
CC -!- FUNCTION: Aux/IAA proteins are short-lived transcriptional factors that
CC function as repressors of early auxin response genes at low auxin
CC concentrations. {ECO:0000250}.
CC -!- SUBUNIT: Homodimers and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Highly expressed in etiolated seedlings. Expressed
CC in roots and flowers. {ECO:0000269|PubMed:16200395}.
CC -!- INDUCTION: By auxin. {ECO:0000269|PubMed:16200395}.
CC -!- SIMILARITY: Belongs to the Aux/IAA family. {ECO:0000305}.
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DR EMBL; DP000011; ABA99793.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF30228.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT17959.1; -; Genomic_DNA.
DR EMBL; AK068213; BAG90803.1; -; mRNA.
DR RefSeq; XP_015620571.1; XM_015765085.1.
DR AlphaFoldDB; P0C132; -.
DR SMR; P0C132; -.
DR STRING; 4530.OS12T0601300-01; -.
DR PaxDb; P0C132; -.
DR PRIDE; P0C132; -.
DR EnsemblPlants; Os12t0601300-01; Os12t0601300-01; Os12g0601300.
DR GeneID; 4352721; -.
DR Gramene; Os12t0601300-01; Os12t0601300-01; Os12g0601300.
DR KEGG; osa:4352721; -.
DR eggNOG; ENOG502QPNB; Eukaryota.
DR HOGENOM; CLU_049393_1_5_1; -.
DR InParanoid; P0C132; -.
DR OMA; YDETIMD; -.
DR OrthoDB; 1203639at2759; -.
DR PlantReactome; R-OSA-5608118; Auxin signalling.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR Genevisible; P0C132; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR033389; AUX/IAA_dom.
DR InterPro; IPR003311; AUX_IAA.
DR InterPro; IPR000270; PB1_dom.
DR PANTHER; PTHR31734; PTHR31734; 1.
DR Pfam; PF02309; AUX_IAA; 1.
DR PROSITE; PS51745; PB1; 1.
PE 2: Evidence at transcript level;
KW Auxin signaling pathway; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation.
FT CHAIN 1..277
FT /note="Auxin-responsive protein IAA30"
FT /id="PRO_0000223229"
FT DOMAIN 160..259
FT /note="PB1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01081"
FT REGION 13..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 53..119
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 12..16
FT /note="EAR-like (transcriptional repression)"
FT /evidence="ECO:0000250"
SQ SEQUENCE 277 AA; 28993 MW; 9979EA93B723E69F CRC64;
MAADLAFEAT ELRLGLPGGG GDGDAAAAAA RSSSGKRGFA ETIDLKLKLE PAAAAVDDDD
DKEEAAADDR EKKVDIVGAD NDDASPPAAA AAGGMKRSPS QSSVVTAAAD PEKPRAPKAQ
VVGWPPVRSY RKNILAVQAD KGKDAADGGG DKSGAGAAAA AFVKVSMDGA PYLRKVDLKM
YKSYLELSKA LEKMFSSFTI GNCGSHGVNG MNESKIADLL NGSEYVPTYE DKDGDWMLVG
DVPWEMFVES CKRLRIMKGS EAIGLAPRAM EKCKNRS
