IAA7_ORYSJ
ID IAA7_ORYSJ Reviewed; 300 AA.
AC Q6H543; Q0E2L7;
DT 07-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Auxin-responsive protein IAA7;
DE AltName: Full=Indoleacetic acid-induced protein 7;
GN Name=IAA7; OrderedLocusNames=Os02g0228900, LOC_Os02g13520;
GN ORFNames=OsJ_05967 {ECO:0000312|EMBL:EEE56602.1}, OSJNBb0035N08.7,
GN P0620H05.33;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
RX PubMed=16200395; DOI=10.1007/s10142-005-0005-0;
RA Jain M., Kaur N., Garg R., Thakur J.K., Tyagi A.K., Khurana J.P.;
RT "Structure and expression analysis of early auxin-responsive Aux/IAA gene
RT family in rice (Oryza sativa).";
RL Funct. Integr. Genomics 6:47-59(2006).
CC -!- FUNCTION: Aux/IAA proteins are short-lived transcriptional factors that
CC function as repressors of early auxin response genes at low auxin
CC concentrations. {ECO:0000250}.
CC -!- SUBUNIT: Homodimers and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed at low levels in roots and shoots.
CC {ECO:0000269|PubMed:16200395}.
CC -!- INDUCTION: Not induced by auxin. {ECO:0000269|PubMed:16200395}.
CC -!- SIMILARITY: Belongs to the Aux/IAA family. {ECO:0000305}.
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DR EMBL; AP005394; BAD25870.1; -; Genomic_DNA.
DR EMBL; AP005756; BAD26156.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF08271.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS77759.1; -; Genomic_DNA.
DR EMBL; CM000139; EEE56602.1; -; Genomic_DNA.
DR EMBL; AK121870; BAH00699.1; -; mRNA.
DR RefSeq; XP_015623972.1; XM_015768486.1.
DR AlphaFoldDB; Q6H543; -.
DR SMR; Q6H543; -.
DR STRING; 4530.OS02T0228900-01; -.
DR PaxDb; Q6H543; -.
DR PRIDE; Q6H543; -.
DR EnsemblPlants; Os02t0228900-01; Os02t0228900-01; Os02g0228900.
DR GeneID; 4328796; -.
DR Gramene; Os02t0228900-01; Os02t0228900-01; Os02g0228900.
DR KEGG; osa:4328796; -.
DR eggNOG; ENOG502QPYY; Eukaryota.
DR HOGENOM; CLU_049393_2_1_1; -.
DR InParanoid; Q6H543; -.
DR OMA; RHGDEQE; -.
DR OrthoDB; 1210341at2759; -.
DR PlantReactome; R-OSA-5608118; Auxin signalling.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000007752; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6H543; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009734; P:auxin-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0009733; P:response to auxin; IC:Gramene.
DR InterPro; IPR033389; AUX/IAA_dom.
DR InterPro; IPR003311; AUX_IAA.
DR InterPro; IPR000270; PB1_dom.
DR PANTHER; PTHR31734; PTHR31734; 1.
DR Pfam; PF02309; AUX_IAA; 1.
DR PROSITE; PS51745; PB1; 1.
PE 2: Evidence at transcript level;
KW Auxin signaling pathway; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation.
FT CHAIN 1..300
FT /note="Auxin-responsive protein IAA7"
FT /id="PRO_0000223206"
FT DOMAIN 177..281
FT /note="PB1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01081"
FT REGION 1..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 92..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 43..47
FT /note="EAR-like (transcriptional repression)"
FT /evidence="ECO:0000250"
FT COMPBIAS 22..42
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 300 AA; 32206 MW; DD4A5F6C7CCE302A CRC64;
MGEASESMKK ISRGRLGGSW MGEPSDHHRH GDEQEEEEKT LELSLGLPGG GWRAACRDKG
TTTKHSIAAA AAADDDDGDK SSMLSLGYST LVSHSQGKAN KNKGSPEEEE AHPPPATGNN
ALASNNNGCF QTRSPSTPVV GWPPVRTFRR NLATSSKASL ELQNGKKAAK AEEIKRAPFI
KINMDGVPIG RKIDLNAFDS YEKLSLAVDK LFRGLLAAQR DPLTAGAKDC QQEDVAISGL
LDGTGEYTLV YEDYEGDKVL VGDVPWGMFV SSVKRLRVLK TSDLSSSLIT SGRKRTAAEC
