IBP_NOSSH
ID IBP_NOSSH Reviewed; 269 AA.
AC A0A7D5JNZ7;
DT 07-APR-2021, integrated into UniProtKB/Swiss-Prot.
DT 02-DEC-2020, sequence version 1.
DT 25-MAY-2022, entry version 6.
DE RecName: Full=Ice-binding protein {ECO:0000303|PubMed:33158891};
DE Short=nIBP {ECO:0000303|PubMed:33158891};
DE Flags: Precursor;
OS Nostoc sp. (strain HG1).
OC Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.
OX NCBI_TaxID=2593659;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, SUBCELLULAR LOCATION, DOMAIN,
RP AND MUTAGENESIS OF 239-VAL--TRP-269.
RX PubMed=33158891; DOI=10.1128/aem.02499-20;
RA Raymond J.A., Janech M.G., Mangiagalli M.;
RT "Ice-Binding Proteins Associated with an Antarctic Cyanobacterium, Nostoc
RT sp. HG1.";
RL Appl. Environ. Microbiol. 87:0-0(2021).
CC -!- FUNCTION: A probable ice-binding protein that has ice-structuring
CC activities in vitro. Thought not to anchor the cyanobacterium to ice
CC surfaces, as its habitat is shallow puddles fed by glacier meltwater.
CC {ECO:0000305|PubMed:33158891}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000305|PubMed:33158891}; Single-pass membrane protein
CC {ECO:0000255}. Note=An ice-binding activity is found in the supernatant
CC and on the surface of clumps of these cells. Only about 80% of the
CC cells are this strain of Nostoc, so other proteins may be contributing
CC to ice binding. Probably anchored to the outer membrane by its PEP C-
CC terminal signal. {ECO:0000305|PubMed:33158891}.
CC -!- DOMAIN: The ice-binding site may be formed by 7 T/S-X-T motifs.
CC {ECO:0000305|PubMed:33158891}.
CC -!- SIMILARITY: Belongs to the ice-binding protein family. {ECO:0000305}.
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DR EMBL; MN082380; QLF98912.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A7D5JNZ7; -.
DR SMR; A0A7D5JNZ7; -.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR021884; Ice-bd_prot.
DR InterPro; IPR013424; PEP_exosort_dom.
DR Pfam; PF11999; Ice_binding; 1.
DR Pfam; PF07589; PEP-CTERM; 1.
PE 1: Evidence at protein level;
KW Cell outer membrane; Membrane; Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..269
FT /note="Ice-binding protein"
FT /evidence="ECO:0000255"
FT /id="PRO_5027728693"
FT TRANSMEM 245..261
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 240..263
FT /note="PEP C-terminal anchor"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MOTIF 45..47
FT /note="Probable ice-binding motif (T/S-X-T) 1"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MOTIF 65..67
FT /note="Probable ice-binding motif (T/S-X-T) 2"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MOTIF 128..130
FT /note="Probable ice-binding motif (T/S-X-T) 3"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MOTIF 154..156
FT /note="Probable ice-binding motif (T/S-X-T) 4"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MOTIF 180..182
FT /note="Probable ice-binding motif (T/S-X-T) 5"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MOTIF 198..200
FT /note="Probable ice-binding motif (T/S-X-T) 6"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MOTIF 218..220
FT /note="Probable ice-binding motif (T/S-X-T) 7"
FT /evidence="ECO:0000305|PubMed:33158891"
FT MUTAGEN 239..269
FT /note="Missing: Protein still structures ice in vitro."
FT /evidence="ECO:0000269|PubMed:33158891"
SQ SEQUENCE 269 AA; 27596 MW; D61EB4DDB62D733C CRC64;
MLKINRKYAI ILAIVAFSSF QTEAKAASIS MLGTASNFGV LGGSTVTNTG PSVITESLGV
STGSSATGFP PAIVNGTIFT SDTVAAQAQV DNATAYNKLA SLIPNKDLTG LDLGGLTLTP
GVYSFSSSAQ LTGILTLDNL GDPNALFVFQ IGSTLTTASN SSIVTTNGDA PNVFFQIGSS
ATLGTGTQFM GNILALTSIT LTTGVNIDCG RALAQNGAVT MDTNKVSNAC YTKPQEKAVV
PEPDSSLAVL GSGLVSLLFA FRKRFRKGW