ICP27_EHV1B
ID ICP27_EHV1B Reviewed; 470 AA.
AC P28939; Q6DLK6;
DT 01-DEC-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-1992, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=mRNA export factor ICP27 homolog;
DE AltName: Full=Transcriptional regulator IE63 homolog;
GN ORFNames=5;
OS Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.
OX NCBI_TaxID=31520;
OH NCBI_TaxID=9796; Equus caballus (Horse).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=1318606; DOI=10.1016/0042-6822(92)90706-u;
RA Telford E.A.R., Watson M.S., McBride K., Davison A.J.;
RT "The DNA sequence of equine herpesvirus-1.";
RL Virology 189:304-316(1992).
CC -!- FUNCTION: Multifunctional regulator of the expression of viral genes
CC that mediates nuclear export of viral intronless mRNAs. This immediate
CC early (EI) protein promotes the nuclear export of viral intronless
CC mRNAs by interacting with mRNAs and host NXF1/TAP (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Homodimer. Homodimerization is required for transactivation.
CC Associates in a complex with RNA, and host export factors NXF1/TAP and
CC ALYREF; these interactions allow nuclear export of viral transcripts.
CC Interacts with three host shuttling SR proteins SRSF1, SRSF3 and SRSF7.
CC Interacts with host SRPK1. Interacts with IE62; this interaction
CC enhances IE62 transactivation (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Host cytoplasm {ECO:0000250}. Host nucleus
CC {ECO:0000250}. Note=Shuttles between the nucleus and the cytoplasm.
CC {ECO:0000250}.
CC -!- DOMAIN: Binds viral intronless RNAs and SR proteins through the Arg-
CC rich region. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the HHV-1 ICP27 protein family. {ECO:0000305}.
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DR EMBL; AY665713; AAT67262.1; -; Genomic_DNA.
DR PIR; F36795; WZBEA4.
DR RefSeq; YP_053050.1; NC_001491.2.
DR SMR; P28939; -.
DR GeneID; 1487550; -.
DR KEGG; vg:1487550; -.
DR Proteomes; UP000001189; Genome.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR008648; ICP27-like.
DR Pfam; PF05459; Herpes_UL69; 1.
PE 3: Inferred from homology;
KW Activator; Early protein; Host cytoplasm; Host nucleus;
KW Host-virus interaction; Metal-binding; Reference proteome; RNA-binding;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..470
FT /note="mRNA export factor ICP27 homolog"
FT /id="PRO_0000115826"
FT ZN_FING 359..446
FT /note="CHC2-type"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 62..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..85
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..107
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 173..187
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 359
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT BINDING 437
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT BINDING 441
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT BINDING 446
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
SQ SEQUENCE 470 AA; 51321 MW; 99AC5258EFB74B0E CRC64;
MALSSVSSCE PMEDEMSIMG SDTEDNFTGG DTCAEATRGL VNKSAFVPTQ TVGTVSALRN
VVGDPPKSVV VSFSASPQRA QPSNPKSERP AFGHGRRNRR RPFRRNNWKQ QQRGWEKPEP
ENVPARQSAG SWPKRSSLPV HMRLGQRGGD SSSADSGHGG AGPSDRWRFK TRTQSVARVH
RNRRRGNANH GSNTPGRSAG DRLNAAAASS IADVCRRVTS SRIGEMFHGA RETLTTPVKN
GGFRAENSSP WAPVLGFGSD QFNPEARRIT WDTLVEHGVN LYKLFEVRSH AAEAARSLRD
AVMRGENLLE ALASADETLS WCKMIVTKNL PMRTRDPIIS SSVALLDNLR LKLEPFMRCY
LSSSGSPTLA ELCDHQRLSD VACVPTFMFV MLARIARAVG SGAETVSRDA LGPDGRVLAD
YVPGACLAGT LEAIDAHKRR CKADTCSLVS AYTLVPVYLH GKYFYCNQIF