ICP27_PSHV1
ID ICP27_PSHV1 Reviewed; 639 AA.
AC Q6UDM4;
DT 05-APR-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 54.
DE RecName: Full=mRNA export factor;
DE AltName: Full=Immediate-early protein IE63;
DE AltName: Full=Infected cell protein 27;
DE Short=ICP27;
GN ORFNames=UL54;
OS Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1)
OS (Pacheco's disease virus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Alphaherpesvirinae; Iltovirus.
OX NCBI_TaxID=670426;
OH NCBI_TaxID=152276; Amazona oratrix (yellow-headed parrot).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16873243; DOI=10.1128/jvi.00134-06;
RA Thureen D.R., Keeler C.L. Jr.;
RT "Psittacid herpesvirus 1 and infectious laryngotracheitis virus:
RT Comparative genome sequence analysis of two avian alphaherpesviruses.";
RL J. Virol. 80:7863-7872(2006).
CC -!- FUNCTION: Multifunctional regulator of the expression of viral genes
CC that mediates nuclear export of viral intronless mRNAs. This immediate
CC early (EI) protein promotes the nuclear export of viral intronless
CC mRNAs (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Host cytoplasm {ECO:0000250}. Host nucleus
CC {ECO:0000250}. Note=Shuttles between the nucleus and the cytoplasm.
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the HHV-1 ICP27 protein family. {ECO:0000305}.
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DR EMBL; AY372243; AAQ73686.1; -; Genomic_DNA.
DR RefSeq; NP_944380.1; NC_005264.1.
DR SMR; Q6UDM4; -.
DR PRIDE; Q6UDM4; -.
DR GeneID; 2657008; -.
DR KEGG; vg:2657008; -.
DR Proteomes; UP000006840; Genome.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR008648; ICP27-like.
DR Pfam; PF05459; Herpes_UL69; 1.
PE 3: Inferred from homology;
KW Early protein; Host cytoplasm; Host nucleus; Host-virus interaction;
KW Metal-binding; Reference proteome; RNA-binding; Zinc; Zinc-finger.
FT CHAIN 1..639
FT /note="mRNA export factor"
FT /id="PRO_0000406858"
FT ZN_FING 525..615
FT /note="CHC2-type"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 63..287
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 322..355
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..143
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 152..168
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..189
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 212..226
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 234..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 325..355
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 525
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT BINDING 606
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT BINDING 610
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
FT BINDING 615
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250|UniProtKB:P10238"
SQ SEQUENCE 639 AA; 71523 MW; C9D59D7A13B737F8 CRC64;
MQAEQTRCAA ARGSAEMESL WHAAPGDEEI PLHPPPTPGA MSLESDSSLD TLAEKIECDL
MDLLGDMGPP CDIDEEEDQL FAEALPPLYS QPTENPPPPN AANSIPEQAG KQPAEGKTNT
ERNERPMRRK RREDGDVGQP NPRRRTHARS RSPRAGSTSS QQPPSSSGGA RKPCVRREAG
DRETSEKPAR GKYCAPFPRQ APHQCQSPPA QTASQKPPPR PQRPPSTTAY SPDRTPHDHQ
ERRHEGAGKM IRSVVTKQDA RKPPRRVPHR GCGTGRHGRR TPEKWGAPPS MVVPLKFTRE
YWEKHRNELK KPVWRDYSRS ACTARDPARA HDSGAECPPT EKRDERRTCA PSQPRWLRED
RNAARFFDKA KDAFGGLALP TDDMCTRNRD LLRAMADEVV DDDDCEDLDL TRQMCFPTMI
GPQSRAAGPV GARMDSWSEL CRRAAFLKAR WSSQPSVTRV ARAVRSLYLT NCSFDELLEA
CDETLTWMLW HQFEDERLCP HDPIFSNIYA LVQGLVTRLG AVLHCHLAAS KSPLADPTRT
SELPLQSATC PLTLFLTFAD RFARVMHGHP HVTLVGHKIV DHEGVLRTLY LPGMCARKIP
VVLDQHANVC RKEECRLLCA QLLGKQYTVG KFLCCDLYA