ID   IDD13_ARATH             Reviewed;         450 AA.
AC   F4JYZ8; Q4PSA5; Q9FKK0;
DT   07-JAN-2015, integrated into UniProtKB/Swiss-Prot.
DT   28-JUN-2011, sequence version 1.
DT   03-AUG-2022, entry version 67.
DE   RecName: Full=Protein indeterminate-domain 13 {ECO:0000303|PubMed:16784536};
GN   Name=IDD13 {ECO:0000303|PubMed:16784536};
GN   OrderedLocusNames=At5g60470 {ECO:0000312|Araport:AT5G60470};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA   Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT   features of the regions of 1,381,565 bp covered by twenty one physically
RT   assigned P1 and TAC clones.";
RL   DNA Res. 5:131-145(1998).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 59-450.
RC   STRAIN=cv. Columbia;
RA   Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA   Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL   Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 59-450.
RC   STRAIN=cv. Columbia;
RA   Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF Clones.";
RL   Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=16784536; DOI=10.1186/1471-2164-7-158;
RA   Colasanti J., Tremblay R., Wong A.Y., Coneva V., Kozaki A., Mable B.K.;
RT   "The maize INDETERMINATE1 flowering time regulator defines a highly
RT   conserved zinc finger protein family in higher plants.";
RL   BMC Genomics 7:158-158(2006).
CC   -!- FUNCTION: Probable transcription factor. {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAB08230.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AB011483; BAB08230.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002688; AED97334.1; -; Genomic_DNA.
DR   EMBL; DQ056731; AAY78875.1; -; mRNA.
DR   EMBL; BT026428; ABH04535.1; -; mRNA.
DR   RefSeq; NP_200855.4; NM_125440.4.
DR   AlphaFoldDB; F4JYZ8; -.
DR   STRING; 3702.AT5G60470.1; -.
DR   PaxDb; F4JYZ8; -.
DR   PRIDE; F4JYZ8; -.
DR   EnsemblPlants; AT5G60470.1; AT5G60470.1; AT5G60470.
DR   GeneID; 836168; -.
DR   Gramene; AT5G60470.1; AT5G60470.1; AT5G60470.
DR   KEGG; ath:AT5G60470; -.
DR   Araport; AT5G60470; -.
DR   TAIR; locus:2175123; AT5G60470.
DR   eggNOG; KOG1721; Eukaryota.
DR   HOGENOM; CLU_014578_3_1_1; -.
DR   InParanoid; F4JYZ8; -.
DR   PRO; PR:F4JYZ8; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; F4JYZ8; baseline and differential.
DR   Genevisible; F4JYZ8; AT.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR   InterPro; IPR022755; Znf_C2H2_jaz.
DR   InterPro; IPR036236; Znf_C2H2_sf.
DR   InterPro; IPR013087; Znf_C2H2_type.
DR   Pfam; PF12171; zf-C2H2_jaz; 1.
DR   SMART; SM00355; ZnF_C2H2; 3.
DR   SUPFAM; SSF57667; SSF57667; 1.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR   PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Metal-binding; Nucleus; Phosphoprotein; Reference proteome;
KW   Repeat; Transcription; Transcription regulation; Zinc; Zinc-finger.
FT   CHAIN           1..450
FT                   /note="Protein indeterminate-domain 13"
FT                   /id="PRO_0000431547"
FT   ZN_FING         64..86
FT                   /note="C2H2-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT   ZN_FING         106..136
FT                   /note="C2H2-type 2"
FT                   /evidence="ECO:0000305"
FT   ZN_FING         141..165
FT                   /note="C2H2-type 2; degenerate"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT   ZN_FING         168..191
FT                   /note="CCHC-type 2; atypical"
FT                   /evidence="ECO:0000305"
FT   REGION          178..190
FT                   /note="SHR-binding"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   REGION          248..280
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           128..135
FT                   /note="Nuclear localization signal"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
FT   BINDING         143
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         146
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         159
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         163
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         170
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         172
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         185
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   BINDING         189
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q700D2"
FT   MOD_RES         54
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q8GYC1"
SQ   SEQUENCE   450 AA;  50484 MW;  A790F51C64DA123F CRC64;
     MTASHSLALS MTKSTSPLIL TLTLSLQPPL KHPRKRETFQ EIQAYPNAEV ISLSPKSLMA
     TNRFFCEICN KGFQREQNLQ LHKRGHNLPW KLKQKTNKNQ VKKKVYICPE KSCVHHDPAR
     ALGDLTGIKK HFSRKHGEKK WKCDKCSKKY AVISDWKAHN KICGSREFRC DCGTLFSRKD
     SFISHRSFCD VLAEESSKFF SVPSPLAANS TIATVTDTNN PILIQSQLDQ SSTGTADLNV
     NNNHTTLFGQ KFTNSNPTQQ QPNALALSSP PSPRSTSDSV HNLWKLQEEE CAHQWLLNEY
     MNNNKNIFHK GIFKNQEDEI KKGNIYSGSN PTDGNIASLF SYNQEAVNMA SFSATTLLQK
     VAQTGTPSSS ETSTTMFGQM TSSIFNNTML NSYCLTAKNN EEELTRDFLG VGSSEDQQRL
     HRHRFPSSVP LTANHDIPKL AATIVGRKQP