IDH_RICPR
ID IDH_RICPR Reviewed; 483 AA.
AC Q9ZDR0;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Isocitrate dehydrogenase [NADP];
DE Short=IDH;
DE EC=1.1.1.42;
DE AltName: Full=IDP;
DE AltName: Full=NADP(+)-specific ICDH;
DE AltName: Full=Oxalosuccinate decarboxylase;
GN Name=icd; OrderedLocusNames=RP265;
OS Rickettsia prowazekii (strain Madrid E).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
OX NCBI_TaxID=272947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Madrid E;
RX PubMed=9823893; DOI=10.1038/24094;
RA Andersson S.G.E., Zomorodipour A., Andersson J.O., Sicheritz-Ponten T.,
RA Alsmark U.C.M., Podowski R.M., Naeslund A.K., Eriksson A.-S., Winkler H.H.,
RA Kurland C.G.;
RT "The genome sequence of Rickettsia prowazekii and the origin of
RT mitochondria.";
RL Nature 396:133-140(1998).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=D-threo-isocitrate + NADP(+) = 2-oxoglutarate + CO2 + NADPH;
CC Xref=Rhea:RHEA:19629, ChEBI:CHEBI:15562, ChEBI:CHEBI:16526,
CC ChEBI:CHEBI:16810, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349; EC=1.1.1.42;
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC Note=Binds 1 Mg(2+) or Mn(2+) ion per subunit. {ECO:0000250};
CC -!- SIMILARITY: Belongs to the isocitrate and isopropylmalate
CC dehydrogenases family. {ECO:0000305}.
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DR EMBL; AJ235271; CAA14727.1; -; Genomic_DNA.
DR PIR; E71681; E71681.
DR RefSeq; NP_220650.1; NC_000963.1.
DR RefSeq; WP_010886251.1; NC_000963.1.
DR AlphaFoldDB; Q9ZDR0; -.
DR SMR; Q9ZDR0; -.
DR STRING; 272947.RP265; -.
DR EnsemblBacteria; CAA14727; CAA14727; CAA14727.
DR KEGG; rpr:RP265; -.
DR PATRIC; fig|272947.5.peg.272; -.
DR eggNOG; COG0473; Bacteria.
DR HOGENOM; CLU_031953_1_2_5; -.
DR OMA; EYDLGAR; -.
DR Proteomes; UP000002480; Chromosome.
DR GO; GO:0004450; F:isocitrate dehydrogenase (NADP+) activity; IEA:UniProtKB-EC.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0051287; F:NAD binding; IEA:InterPro.
DR GO; GO:0006097; P:glyoxylate cycle; IEA:UniProtKB-KW.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
DR InterPro; IPR019818; IsoCit/isopropylmalate_DH_CS.
DR InterPro; IPR014273; Isocitrate_DH_aproteobac-typ.
DR InterPro; IPR024084; IsoPropMal-DH-like_dom.
DR InterPro; IPR040978; TT1725.
DR PANTHER; PTHR11835:SF43; PTHR11835:SF43; 1.
DR Pfam; PF00180; Iso_dh; 1.
DR Pfam; PF18324; TT1725; 1.
DR SMART; SM01329; Iso_dh; 1.
DR TIGRFAMs; TIGR02924; ICDH_alpha; 1.
DR PROSITE; PS00470; IDH_IMDH; 1.
PE 3: Inferred from homology;
KW Glyoxylate bypass; Magnesium; Manganese; Metal-binding; NADP;
KW Oxidoreductase; Phosphoprotein; Reference proteome;
KW Tricarboxylic acid cycle.
FT CHAIN 1..483
FT /note="Isocitrate dehydrogenase [NADP]"
FT /id="PRO_0000083557"
FT BINDING 89
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 99
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 121
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 208
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 208
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 232
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 236
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT SITE 128
FT /note="Critical for catalysis"
FT /evidence="ECO:0000250"
FT SITE 175
FT /note="Critical for catalysis"
FT /evidence="ECO:0000250"
FT MOD_RES 83
FT /note="Phosphoserine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 483 AA; 54318 MW; 17225FB9214E40A8 CRC64;
MAAFTPITIA YGDGIGPEIM EAVLYILRKA EARISLETIE VGEKLYKKHY TSGISEESWD
VIQRTGIILK APITTPQSGG YKSLNVTIRK TLQLFANIRP VVSFYPFTRT LHPNLNLTII
RENEEDLYSG VEYRQTHNMY ESMKLISHTG CKKIIRYAFE YAIKNNRKKV TCLTKDNIMK
FSDGIFHRVF NEIAKEYPQI NNEHYIIDIG TAKLATKPEI FDIIVTSNLY GDIISDVAAE
ISGSVGLAGS ANIGQHYAMF EAVHGSAPDI AGKGIANPSG LLNAAIMMLV HIGQGDIASL
IENAWKKTIE DGVHTFDIYN EHSSSKKVCT KEFAVEVIKR LGQLPITLPK AAYPLIVKKQ
ESNIDYKIDT REVKKLVGTD IFINMHVFSA HDIADKINKL DIGNFELKTI SSKGLKLWPH
DSRFEIISDH WCCRFMNKDG TEIKHLDITM LLQSLSKANI DFIKVENLFE FDGVAWYSLA
QGE