IDL3_ARATH
ID IDL3_ARATH Reviewed; 99 AA.
AC Q6DUW7;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Protein IDA-LIKE 3;
DE Flags: Precursor;
GN Name=IDL3; OrderedLocusNames=At5g09805; ORFNames=F17I14, MYH9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND TISSUE SPECIFICITY.
RX PubMed=12972671; DOI=10.1105/tpc.014365;
RA Butenko M.A., Patterson S.E., Grini P.E., Stenvik G.-E., Amundsen S.S.,
RA Mandal A., Aalen R.B.;
RT "Inflorescence deficient in abscission controls floral organ abscission in
RT Arabidopsis and identifies a novel family of putative ligands in plants.";
RL Plant Cell 15:2296-2307(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT features of the regions of 1,081,958 bp covered by seventeen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:379-391(1998).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [5]
RP FUNCTION, AND TISSUE SPECIFICITY.
RX PubMed=18660431; DOI=10.1105/tpc.108.059139;
RA Stenvik G.-E., Tandstad N.M., Guo Y., Shi C.-L., Kristiansen W.,
RA Holmgren A., Clark S.E., Aalen R.B., Butenko M.A.;
RT "The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to
RT induce abscission in arabidopsis through the receptor-like kinases HAESA
RT and HAESA-LIKE2.";
RL Plant Cell 20:1805-1817(2008).
CC -!- FUNCTION: May be involved in floral abscission.
CC {ECO:0000269|PubMed:18660431}.
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in flowers and seedlings. Detected at the
CC base of pedicel, in the floral abscission zone and in vascular tissues.
CC {ECO:0000269|PubMed:12972671, ECO:0000269|PubMed:18660431}.
CC -!- MISCELLANEOUS: IDL3 is only partially redundant with IDA.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY642387; AAT66017.1; -; Genomic_DNA.
DR EMBL; AL353994; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AB016893; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED91449.1; -; Genomic_DNA.
DR RefSeq; NP_001318520.1; NM_001343069.1.
DR PDB; 7OGZ; X-ray; 2.70 A; CCC/FFF=79-90.
DR PDBsum; 7OGZ; -.
DR AlphaFoldDB; Q6DUW7; -.
DR SMR; Q6DUW7; -.
DR STRING; 3702.AT5G09805.1; -.
DR PaxDb; Q6DUW7; -.
DR EnsemblPlants; AT5G09805.1; AT5G09805.1; AT5G09805.
DR GeneID; 28721130; -.
DR Gramene; AT5G09805.1; AT5G09805.1; AT5G09805.
DR KEGG; ath:AT5G09805; -.
DR Araport; AT5G09805; -.
DR TAIR; locus:4010713951; AT5G09805.
DR HOGENOM; CLU_186343_0_1_1; -.
DR InParanoid; Q6DUW7; -.
DR OMA; DHKSVQF; -.
DR OrthoDB; 1639584at2759; -.
DR PhylomeDB; Q6DUW7; -.
DR PRO; PR:Q6DUW7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q6DUW7; baseline and differential.
DR GO; GO:0048046; C:apoplast; TAS:TAIR.
DR GO; GO:0005615; C:extracellular space; IEA:UniProtKB-SubCell.
DR GO; GO:0010227; P:floral organ abscission; IMP:TAIR.
DR InterPro; IPR039639; IDA-like.
DR PANTHER; PTHR33599; PTHR33599; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Secreted; Signal.
FT SIGNAL 1..32
FT /evidence="ECO:0000255"
FT CHAIN 33..99
FT /note="Protein IDA-LIKE 3"
FT /id="PRO_0000383591"
FT REGION 36..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 73..99
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 79..99
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 99 AA; 11047 MW; 61E9443CBCE7709F CRC64;
MSSRSHRSRK YQLTRTIPIL VLLLVLLSCC NGARTTNVFN TSSPPKQKDV VSPPHDHVHH
QVQDHKSVQF LGSLPRQFPV PTSGPSRKHN EIGLSSTKT
