IDRA_DENS1
ID IDRA_DENS1 Reviewed; 900 AA.
AC P0DV66;
DT 25-MAY-2022, integrated into UniProtKB/Swiss-Prot.
DT 25-MAY-2022, sequence version 1.
DT 03-AUG-2022, entry version 2.
DE RecName: Full=Iodate reductase subunit IdrA {ECO:0000305};
DE EC=1.-.-.- {ECO:0000305|PubMed:34215855};
GN Name=idrA {ECO:0000303|PubMed:34215855}; ORFNames=I8J34_RS03780;
OS Denitromonas sp. (strain IR12).
OC Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;
OC Rhodocyclaceae; Denitromonas; unclassified Denitromonas.
OX NCBI_TaxID=2795389;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], FUNCTION, SUBUNIT, AND
RP DISRUPTION PHENOTYPE.
RC STRAIN=IR12;
RX PubMed=34215855; DOI=10.1038/s41396-021-01034-5;
RA Reyes-Umana V., Henning Z., Lee K., Barnum T.P., Coates J.D.;
RT "Genetic and phylogenetic analysis of dissimilatory iodate-reducing
RT bacteria identifies potential niches across the world's oceans.";
RL ISME J. 16:38-49(2022).
CC -!- FUNCTION: Involved in iodate respiration (PubMed:34215855). May accept
CC electrons from cytochrome c551, and catalyze the reduction of iodate
CC (IO(3)(-)) to produce the chemically unstable intermediate hypoiodous
CC acid (HIO). This intermediate then undergoes abiotic disproportionation
CC to yield two molecules of iodide (I(-)) and one molecule of iodate. The
CC resultant iodate subsequently cycles back into the reductive pathway
CC (PubMed:34215855). The initial reduction of iodate may inadvertently
CC produce low levels of incidental toxic H(2)O(2), which is detoxified by
CC IdrP1 and IdrP2 (PubMed:34215855). {ECO:0000269|PubMed:34215855}.
CC -!- COFACTOR:
CC Name=[3Fe-4S] cluster; Xref=ChEBI:CHEBI:21137;
CC Evidence={ECO:0000250|UniProtKB:Q7SIF4};
CC Note=Binds 1 [3Fe-4S] cluster per subunit.
CC {ECO:0000250|UniProtKB:Q7SIF4};
CC -!- COFACTOR:
CC Name=Mo-bis(molybdopterin guanine dinucleotide);
CC Xref=ChEBI:CHEBI:60539; Evidence={ECO:0000250|UniProtKB:Q7SIF4};
CC Note=Binds 1 molybdenum-bis(molybdopterin guanine dinucleotide) (Mo-
CC bis-MGD) cofactor per subunit. {ECO:0000250|UniProtKB:Q7SIF4};
CC -!- SUBUNIT: The iodate reductase (Idr) complex is composed of a
CC molybdopterin-dependent iodate reductase (IdrA and IdrB subunits) and
CC two associated peroxidases (IdrP1 and IdrP2).
CC {ECO:0000305|PubMed:34215855}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000250|UniProtKB:A0A391NTR7}.
CC Note=May be co-transported with IdrB into the periplasm.
CC {ECO:0000303|PubMed:34215855}.
CC -!- DISRUPTION PHENOTYPE: Deletion mutant is incapable of growth via iodate
CC respiration, while growth under oxic conditions remains unimpaired.
CC {ECO:0000269|PubMed:34215855}.
CC -!- SIMILARITY: Belongs to the prokaryotic molybdopterin-containing
CC oxidoreductase family. {ECO:0000305}.
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DR EMBL; JAEKFT010000003; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR InterPro; IPR041632; AioA_3Fe-4S.
DR InterPro; IPR014066; Arsenite_oxidase_lsu.
DR InterPro; IPR009010; Asp_de-COase-like_dom_sf.
DR InterPro; IPR006657; MoPterin_dinucl-bd_dom.
DR InterPro; IPR006656; Mopterin_OxRdtase.
DR Pfam; PF00384; Molybdopterin; 1.
DR Pfam; PF01568; Molydop_binding; 1.
DR Pfam; PF18465; Rieske_3; 1.
DR SUPFAM; SSF50692; SSF50692; 1.
DR TIGRFAMs; TIGR02693; arsenite_ox_L; 1.
PE 1: Evidence at protein level;
KW 3Fe-4S; Iron; Iron-sulfur; Metal-binding; Molybdenum; Oxidoreductase;
KW Periplasm.
FT CHAIN 1..900
FT /note="Iodate reductase subunit IdrA"
FT /id="PRO_0000455404"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 35
FT /ligand="[3Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:21137"
FT /evidence="ECO:0000250|UniProtKB:Q7SIF4"
FT BINDING 38
FT /ligand="[3Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:21137"
FT /evidence="ECO:0000250|UniProtKB:Q7SIF4"
FT BINDING 42
FT /ligand="[3Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:21137"
FT /evidence="ECO:0000250|UniProtKB:Q7SIF4"
FT SITE 113
FT /note="Involved in charge transfer"
FT /evidence="ECO:0000250|UniProtKB:Q7SIF4"
SQ SEQUENCE 900 AA; 101089 MW; 95EEE6C204E8CD7E CRC64;
MSENIKQGGA GTFMQAPQDS VPLPPKDAEV MTTACDYCTV ACGYKVYRWP VGKEGGMKAK
DNAFNADFPH QQIFGAWASP AQHNIVNHNG RSHHVLVLPD RDTTVVNPGG NHSIRGGTLA
QKCYNPSNRT SERLLYPMIR VRGTLMPVSW DLATEVMADI SQYILAKYGE HAWAMKTYSY
QYFENTYAIT KLGMTSIGTP AFAWHDKASA TNDATGLDDA GVNSFASSDQ DWADCEVAFL
SGVDPYETKT TLFTQWMMPG DKKFIFVTPH RTMGVAWAES TGRGMWLPII PGTDTVLHLA
LARIIVENGW QDQAFIDKWV ANKWEVDSGY GRGTRNTGWQ WRTTWGKWQS DWKDYSAWIL
KQKEGELETA AKITGLRAED IRKAAEWIAK PKADGTRVKA SFMLEKGNYW TNNYMNSASL
ASLGLICGSG NRPGQMISRG GGHQRGGMSA GGGSGWLSPE KYPGRRKKSF NLDRWMMNGN
VRFAWVIGTT WTAAMMASQA LQDKMFSLTR GNPHQISSLD RKAIFETLKQ RVDSGGTVIA
NSDIYPCVPV GTEYADIVLP AATWGEDNFT RCNSERRLRL YSKFYDAPGE AKPDWWIIAK
FAQKMGYDKD GSYQWKNSND VFEEAARFGR NGVLNYHPLV VKAKEKGVKG HELLRTYGTD
GIQTPIRMKD GELVGTQRLH DPANDWDEVE GQEVKRKWLY AFGTHSGKAI LLKTPWDYPG
WSQFYKAALP RKEKGEVWVT NGRVNETWQS GFDDLRKPYL SQRWPYPMLI MHPDEAKPRG
IESGDFVQVY NDTVYIQMGE PQGVKEDDLY FDTLMKNGHI KTTDGQFVAV AIVSEEMRPG
VVMANFNYPQ APANSVVHAV PDPMTNNYRY KLGRGVLTKV GESPYKHSFT SMTLKPRDIV