IDRP1_DENS1
ID IDRP1_DENS1 Reviewed; 376 AA.
AC P0DV68;
DT 25-MAY-2022, integrated into UniProtKB/Swiss-Prot.
DT 25-MAY-2022, sequence version 1.
DT 03-AUG-2022, entry version 2.
DE RecName: Full=Cytochrome-c peroxidase IdrP1 {ECO:0000305};
DE EC=1.11.1.5 {ECO:0000305|PubMed:34215855};
DE AltName: Full=Iodate reductase subunit IdrP1 {ECO:0000305};
DE Flags: Precursor;
GN Name=idrP1 {ECO:0000303|PubMed:34215855}; ORFNames=I8J34_RS03790;
OS Denitromonas sp. (strain IR12).
OC Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;
OC Rhodocyclaceae; Denitromonas; unclassified Denitromonas.
OX NCBI_TaxID=2795389;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], FUNCTION, AND SUBUNIT.
RC STRAIN=IR12;
RX PubMed=34215855; DOI=10.1038/s41396-021-01034-5;
RA Reyes-Umana V., Henning Z., Lee K., Barnum T.P., Coates J.D.;
RT "Genetic and phylogenetic analysis of dissimilatory iodate-reducing
RT bacteria identifies potential niches across the world's oceans.";
RL ISME J. 16:38-49(2022).
CC -!- FUNCTION: Involved in iodate respiration (PubMed:34215855). May play a
CC critical role in detoxification of inadvertent H(2)O(2) generated by
CC the iodate reductase IdrA/IdrB (PubMed:34215855).
CC {ECO:0000269|PubMed:34215855}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 Fe(II)-[cytochrome c] + 2 H(+) + H2O2 = 2 Fe(III)-
CC [cytochrome c] + 2 H2O; Xref=Rhea:RHEA:16581, Rhea:RHEA-COMP:10350,
CC Rhea:RHEA-COMP:14399, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16240, ChEBI:CHEBI:29033, ChEBI:CHEBI:29034; EC=1.11.1.5;
CC Evidence={ECO:0000305|PubMed:34215855};
CC -!- COFACTOR:
CC Name=heme c; Xref=ChEBI:CHEBI:61717;
CC Evidence={ECO:0000250|UniProtKB:P14532};
CC Note=Binds 2 heme c groups. {ECO:0000250|UniProtKB:P14532};
CC -!- SUBUNIT: The iodate reductase (Idr) complex is composed of a
CC molybdopterin-dependent iodate reductase (IdrA and IdrB subunits) and
CC two associated peroxidases (IdrP1 and IdrP2).
CC {ECO:0000305|PubMed:34215855}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000250|UniProtKB:A0A391NGM7}.
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DR EMBL; JAEKFT010000003; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.10.760.10; -; 2.
DR InterPro; IPR009056; Cyt_c-like_dom.
DR InterPro; IPR036909; Cyt_c-like_dom_sf.
DR InterPro; IPR004852; Di-haem_cyt_c_peroxidsae.
DR InterPro; IPR026259; MauG/Cytc_peroxidase.
DR Pfam; PF03150; CCP_MauG; 1.
DR PIRSF; PIRSF000294; Cytochrome-c_peroxidase; 1.
DR SUPFAM; SSF46626; SSF46626; 2.
DR PROSITE; PS51007; CYTC; 2.
PE 1: Evidence at protein level;
KW Heme; Iron; Metal-binding; Oxidoreductase; Periplasm; Repeat; Signal.
FT SIGNAL 1..24
FT /evidence="ECO:0000255"
FT CHAIN 25..376
FT /note="Cytochrome-c peroxidase IdrP1"
FT /evidence="ECO:0000255"
FT /id="PRO_0000455408"
FT DOMAIN 49..157
FT /note="Cytochrome c 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT DOMAIN 203..354
FT /note="Cytochrome c 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 71
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_label="1"
FT /note="covalent"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 74
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_label="1"
FT /note="covalent"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 75
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_label="1"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 218
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_label="2"
FT /note="covalent"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 221
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_label="2"
FT /note="covalent"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
FT BINDING 222
FT /ligand="heme c"
FT /ligand_id="ChEBI:CHEBI:61717"
FT /ligand_label="2"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00433"
SQ SEQUENCE 376 AA; 40712 MW; 6DE5D03663DDF7DB CRC64;
MGHIRSIRLA LAVAAVCTAA SAAAGDAKFP PLGPLPPVPV PADNPMTADK VALGKQLFWD
NRLSGDGSTP CVSCHLPALG WGDGGAISRG YPGTKHWRNS QTIVNSAYYN KLFWAGSVTS
LEAQAPSAAE GGVAGNGDRS LMEMRLRFIP EYVAAFKNVF GADWPRMTQA YAAIAAYQRT
VVSDATRVPF DRWQAGDKAA MSAEAQRGYA LFSGKAGCIA CHNGPLASDQ RFYNLGLPEH
PDLAEDPLLQ ITHRWEQYQK GTTEDGYRHA DRDKGYYYQT KNPKDIGKFR TPSLREVKYT
GPYMHNGTLA TLDEVVAFYN AGGGTAPGKT DKLKPLGLTE QESKDLVAFV EALSMTEPLI
HDDPKLPGDY QPLATQ